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2018-09-09 Jim ProcterJAL-3091 changed release date to 10th September - tweak... releases/Release_2_10_5_Branch Release_2_10_5 commit | commitdiff | tree | snapshot
2018-09-09 Jim ProcterJAL-3106 normalise extension before checking if it... commit | commitdiff | tree | snapshot
2018-09-07 Jim ProcterJAL-3107 update any group associated annotation rows... commit | commitdiff | tree | snapshot
2018-09-07 Jim ProcterJAL-2988 JAL-2968 renamed patched VAqua5 to VAqua5... commit | commitdiff | tree | snapshot
2018-09-07 Jim ProcterJAL-2988 if selected file is null (On Java 10/OSX ... commit | commitdiff | tree | snapshot
2018-09-07 Jim ProcterJAL-2988 workaround: overload getSelectedFile() because... commit | commitdiff | tree | snapshot
2018-09-07 Jim ProcterJAL-3106 use .jvp as default commit | commitdiff | tree | snapshot
2018-09-07 Jim ProcterJAL-3105 fix for focus transfer after window closed... commit | commitdiff | tree | snapshot
2018-09-06 Jim ProcterJAL-3091 code committed in error (failed patch for... commit | commitdiff | tree | snapshot
2018-09-06 Jim ProcterJAL-3091 release notes for JAL-3104 commit | commitdiff | tree | snapshot
2018-09-06 Jim ProcterJAL-3105 reallocate quality and consensus annotation... commit | commitdiff | tree | snapshot
2018-09-06 Jim ProcterJAL-2854 compute visible annotation panel height and... commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3065 don’t quote class path args for Runtime.exec... commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3091 update whats new! commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3091 update Java 10 known issues/workarounds in... commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3091 known defect in whats new for Java 10 issues... commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3091 add Ben Soares to authors list and switch... commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3091 release notes for updated memory settings commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3091 release notes commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3101 increase default heap size in IA and JNLP... commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterMerge branch 'patch/VAqua_saveload_update_JAL-2988... commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-2988 update InstallAnywhere install dependencies... patch/VAqua_saveload_update_JAL-2988 commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3091 release date set for Thursday 6th September commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception_nogroov... commit | commitdiff | tree | snapshot
2018-09-05 Jim ProcterJAL-3065 - amended commit 4906697ab6e5a79fbce3baae89f7... bug/JAL-3065_DH_keyPair_Exception_nogroovysettings commit | commitdiff | tree | snapshot
2018-09-04 Jim ProcterJAL-3091 JAL-2988 release notes re Java 10 and OSX commit | commitdiff | tree | snapshot
2018-09-03 Jim ProcterMerge branch 'patch/VAqua_saveload_update_JAL-2988... commit | commitdiff | tree | snapshot
2018-09-03 Jim ProcterMerge branch 'releases/Release_2_10_5_Branch' of source... commit | commitdiff | tree | snapshot
2018-09-03 Jim ProcterJAL-3091 -Dnosign to disable jar signing phase of build commit | commitdiff | tree | snapshot
2018-09-03 Jim ProcterJAL-3091 -Dnosign to disable jar signing phase of build commit | commitdiff | tree | snapshot
2018-09-03 Jim ProcterJAL-3091 release notes and whats new ! commit | commitdiff | tree | snapshot
2018-09-03 gmungocMerge branch 'trialMerge' into releases/Release_2_10_5_... commit | commitdiff | tree | snapshot
2018-09-03 gmungocJAL-3076 fetch Ensembl sequence as JSON instead of... commit | commitdiff | tree | snapshot
2018-09-03 Jim ProcterJAL-3065 release notes commit | commitdiff | tree | snapshot
2018-09-03 Jim ProcterMerge branch 'bug/JAL-3065_DH_keyPair_Exception' into... commit | commitdiff | tree | snapshot
2018-09-03 Jim ProcterJAL-3087 release notes commit | commitdiff | tree | snapshot
2018-08-31 Jim ProcterJAL-3095 account for sequence start when highlighting... commit | commitdiff | tree | snapshot
2018-08-31 Jim ProcterJAL-3053 JAL-3061 JAL-3095 release notes commit | commitdiff | tree | snapshot
2018-08-31 Jim ProcterMerge branch 'bug/JAL-3061_RNA_secondary_structure_anno... commit | commitdiff | tree | snapshot
2018-08-31 Jim ProcterMerge branch 'releases/Release_2_10_5_Branch' of source... commit | commitdiff | tree | snapshot
2018-08-31 Jim ProcterJAL-3095 release notes commit | commitdiff | tree | snapshot
2018-08-31 Jim Procterjava doc and fix for JAL-3095 - region of trimmed RNA... commit | commitdiff | tree | snapshot
2018-08-31 gmungocJAL-3003 remove redundant call to drawSelectionGroup commit | commitdiff | tree | snapshot
2018-08-30 Jim ProcterJAL-3092 release notes commit | commitdiff | tree | snapshot
2018-08-30 Jim ProcterJAL-3092 make sure base pair counter is always moved... commit | commitdiff | tree | snapshot
2018-08-29 Jim ProcterJAL-3091 release notes for JAL-3003 JAL-3059 commit | commitdiff | tree | snapshot
2018-08-28 Jim ProcterJAL-3003 different coloured borders in demo annotation... commit | commitdiff | tree | snapshot
2018-08-28 gmungocJAL-3059 use correct border colour for groups commit | commitdiff | tree | snapshot
2018-08-28 gmungocJAL-3003 draw selection group outline on main graphics... commit | commitdiff | tree | snapshot
2018-08-28 Jim ProcterJAL-247 release notes commit | commitdiff | tree | snapshot
2018-08-28 gmungocJAL-247 comment to clarify wrapped print algorithm commit | commitdiff | tree | snapshot
2018-08-28 gmungocJAL-247 print/export wrapped uses common code to draw... commit | commitdiff | tree | snapshot
2018-08-28 gmungocJAL-3087 include full alignment height in repeating... commit | commitdiff | tree | snapshot
2018-08-28 gmungocJAL-247 draw/print sequence ids now uses common code... commit | commitdiff | tree | snapshot
2018-08-28 Jim ProcterJAL-3091 release 2.10.5 added to release notes commit | commitdiff | tree | snapshot
2018-08-27 Ben SoaresJAL-3061 / JAL-3053 commit | commitdiff | tree | snapshot
2018-08-22 Jim ProcterJAL-2988 workaround for jalview save as dialogs - clear... commit | commitdiff | tree | snapshot
2018-08-22 Jim ProcterJAL-2988 JAL-2976 update to latest VAqua release: VAqua5 commit | commitdiff | tree | snapshot
2018-08-03 Ben SoaresJAL-3061 commit | commitdiff | tree | snapshot
2018-08-03 Ben SoaresMerge branch 'bug/JAL-3061_RNA_secondary_structure_anno... commit | commitdiff | tree | snapshot
2018-08-02 Ben SoaresJAL-3053 commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterMerge branch 'task/JAL-3047_clover2104b1_cherrypick... releases/Release_2_10_4_Branch commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 don't set classes unconditionally (forgot... task/JAL-3047_clover2104b1_cherrypick commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 don’t let the makedist task complete if a... commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 ‘cloverclasses’ build directory for instrument... commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 enable clover for testng commit | commitdiff | tree | snapshot
2018-08-01 Jim ProcterJAL-3047 ignore clover output dir commit | commitdiff | tree | snapshot
2018-07-31 bsoaresStockholm file for test commit | commitdiff | tree | snapshot
2018-07-30 bsoaresFixed bug ignoring "alpha" extended braces in RNA SS... commit | commitdiff | tree | snapshot
2018-07-17 bsoaresJAL-3065 commit | commitdiff | tree | snapshot
2018-06-07 Jim ProcterJAL-3009 release notes commit | commitdiff | tree | snapshot
2018-06-07 Jim ProcterMerge branch 'bugs/JAL-3009_blockingNetworkThreads... commit | commitdiff | tree | snapshot
2018-06-07 Jim ProcterJAL-2999 what's new and tweak release notes order commit | commitdiff | tree | snapshot
2018-06-07 gmungocJAL-2920 format/comment tidy commit | commitdiff | tree | snapshot
2018-06-07 gmungocJAL-2920 wrap description in <html/> if it includes... commit | commitdiff | tree | snapshot
2018-06-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' of https... commit | commitdiff | tree | snapshot
2018-06-06 gmungocJAL-2920 unit tests for 3 or more original or variant... commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2999 refine release notes commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2999 release 2.10.4b1 on Thursday (promise!) commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2920 release notes commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterMerge branch 'bug/JAL-2920_uniprotvariantfeature' into... commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2920 revised TODO for JAL-3025 bug/JAL-2920_uniprotvariantfeature commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2920 don’t output variant/original sequence as... commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-2920 JAL-3017 uniprot XML schema included in mappin... commit | commitdiff | tree | snapshot
2018-06-06 Jim ProcterJAL-1920 JAL-3017 use newline not <br/> in description... commit | commitdiff | tree | snapshot
2018-06-05 Jim ProcterJAL-3009 news reader thread should be in background... bugs/JAL-3009_blockingNetworkThreads commit | commitdiff | tree | snapshot
2018-06-05 Jim ProcterJAL-3009 Identifiers.Org retrieval on background thread. commit | commitdiff | tree | snapshot
2018-06-04 Jim ProcterJAL-3017 parse multiple variant elements for uniprot... commit | commitdiff | tree | snapshot
2018-06-04 Jim ProcterJAL-2999 update release notes and patch date to 5th... commit | commitdiff | tree | snapshot
2018-06-02 Jim ProcterJAL-3017 parse multiple variant elements for uniprot... commit | commitdiff | tree | snapshot
2018-05-30 Jim ProcterJAL-2999 2.10.4b1 release 31st May commit | commitdiff | tree | snapshot
2018-05-26 Jim ProcterJAL-2999 release date for 2.10.4b1 set for 27th May... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'documentation/JAL-2999_r2104b1' into... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2992panelHeight' into releases... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-1460_dragndropWindows' into relea... commit | commitdiff | tree | snapshot
2018-05-25 gmungocJAL-2992 simpler heuristic for available height bug/JAL-2992panelHeight commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'bug/JAL-2991_exporttosvgwrapview' into... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterMerge branch 'feature/JAL-2994chimeraPath' into release... commit | commitdiff | tree | snapshot
2018-05-25 Jim ProcterJAL-1460 clarify release notes - and mention that short... commit | commitdiff | tree | snapshot
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