site/j2s/jalview/viewmodel/seqfeatures/FeatureRendererSettings.js

   1 Clazz.declarePackage ("jalview.viewmodel.seqfeatures");\r
   2 Clazz.load (null, "jalview.viewmodel.seqfeatures.FeatureRendererSettings", ["jalview.schemes.GraduatedColor", "java.util.Arrays", "java.util.concurrent.ConcurrentHashMap"], function () {\r
   3 c$ = Clazz.decorateAsClass (function () {\r
   4 this.renderOrder = null;\r
   5 this.featureGroups = null;\r
   6 this.featureColours = null;\r
   7 this.transparency = 0;\r
   8 this.featureOrder = null;\r
   9 Clazz.instantialize (this, arguments);\r
  10 }, jalview.viewmodel.seqfeatures, "FeatureRendererSettings", null, Cloneable);\r
  11 Clazz.makeConstructor (c$, \r
  12 function (renderOrder, featureGroups, featureColours, transparency, featureOrder) {\r
  13 this.renderOrder = java.util.Arrays.copyOf (renderOrder, renderOrder.length);\r
  14 this.featureGroups =  new java.util.concurrent.ConcurrentHashMap (featureGroups);\r
  15 this.featureColours =  new java.util.concurrent.ConcurrentHashMap (featureColours);\r
  16 this.transparency = transparency;\r
  17 this.featureOrder =  new java.util.concurrent.ConcurrentHashMap (featureOrder);\r
  18 }, "~A,java.util.Hashtable,java.util.Hashtable,~N,java.util.Hashtable");\r
  19 Clazz.makeConstructor (c$, \r
  20 function (fr) {\r
  21 this.renderOrder = null;\r
  22 this.featureGroups =  new java.util.concurrent.ConcurrentHashMap ();\r
  23 this.featureColours =  new java.util.concurrent.ConcurrentHashMap ();\r
  24 this.featureOrder =  new java.util.concurrent.ConcurrentHashMap ();\r
  25 if (fr.renderOrder != null) {\r
  26 this.renderOrder =  new Array (fr.renderOrder.length);\r
  27 System.arraycopy (fr.renderOrder, 0, this.renderOrder, 0, fr.renderOrder.length);\r
  28 }if (fr.featureGroups != null) {\r
  29 this.featureGroups =  new java.util.concurrent.ConcurrentHashMap (fr.featureGroups);\r
  30 }if (fr.featureColours != null) {\r
  31 this.featureColours =  new java.util.concurrent.ConcurrentHashMap (fr.featureColours);\r
  32 }var en = fr.featureColours.keySet ().iterator ();\r
  33 while (en.hasNext ()) {\r
  34 var next = en.next ();\r
  35 var val = this.featureColours.get (next);\r
  36 if (Clazz.instanceOf (val, jalview.schemes.GraduatedColor)) {\r
  37 this.featureColours.put (next,  new jalview.schemes.GraduatedColor (val));\r
  38 }}\r
  39 this.transparency = fr.transparency;\r
  40 if (fr.featureOrder != null) {\r
  41 this.featureOrder =  new java.util.concurrent.ConcurrentHashMap (fr.featureOrder);\r
  42 }}, "jalview.viewmodel.seqfeatures.FeatureRendererModel");\r
  43 });\r