JAL-1807 - Bob's last(?) before leaving Dundee -- adds fast file loading

[jalviewjs.git] / site / j2s / jalview / analysis / Conservation.js

diff --git a/site/j2s/jalview/analysis/Conservation.js b/site/j2s/jalview/analysis/Conservation.js
index 328032a..809884c 100644 (file)
--- a/site/j2s/jalview/analysis/Conservation.js
+++ b/site/j2s/jalview/analysis/Conservation.js
@@ -1,5 +1,5 @@
 Clazz.declarePackage ("jalview.analysis");
-Clazz.load (null, "jalview.analysis.Conservation", ["jalview.datamodel.Annotation", "$.Sequence", "jalview.schemes.ResidueProperties", "jalview.util.Comparison", "java.awt.Color", "java.lang.Character", "$.Double", "$.StringBuffer", "java.util.Hashtable", "$.Vector", "JU.DebugJS"], function () {
+Clazz.load (null, "jalview.analysis.Conservation", ["jalview.datamodel.Annotation", "$.Sequence", "jalview.schemes.ResidueProperties", "jalview.util.Comparison", "java.awt.Color", "java.lang.Character", "$.Double", "$.StringBuffer", "java.util.Hashtable", "$.Vector"], function () {
 c$ = Clazz.decorateAsClass (function () {
 this.sequences = null;
 this.start = 0;
@@ -353,7 +353,6 @@ vprop = value - qmin;
 vprop /= qmax;
 quality2.annotations[i] =  new jalview.datamodel.Annotation (" ", String.valueOf (value), ' ', value,  new java.awt.Color (minR + (maxR * vprop), minG + (maxG * vprop), minB + (maxB * vprop)));
 }}
-JU.DebugJS._ ("Conservation");
 }, "jalview.datamodel.AlignmentAnnotation,jalview.datamodel.AlignmentAnnotation,~N,~N");
 c$.calculateConservation = Clazz.defineMethod (c$, "calculateConservation", 
 function (name, consHash, threshold, seqs, start, end, posOrNeg, consPercGaps, calcQuality) {