Merge branch 'master' of https://source.jalview.org/git/jalviewjs.git

[jalviewjs.git] / site / j2s / jalview / datamodel / SequenceNode.js

diff --git a/site/j2s/jalview/datamodel/SequenceNode.js b/site/j2s/jalview/datamodel/SequenceNode.js
index 54cb491..2069471 100644 (file)
--- a/site/j2s/jalview/datamodel/SequenceNode.js
+++ b/site/j2s/jalview/datamodel/SequenceNode.js
@@ -1,64 +1,64 @@
-Clazz.declarePackage ("jalview.datamodel");\r
-Clazz.load (["jalview.datamodel.BinaryNode", "java.awt.Color"], "jalview.datamodel.SequenceNode", null, function () {\r
-c$ = Clazz.decorateAsClass (function () {\r
-this.dist = 0;\r
-this.count = 0;\r
-this.height = 0;\r
-this.ycount = 0;\r
-this.color = null;\r
-this.dummy = false;\r
-this.placeholder = false;\r
-Clazz.instantialize (this, arguments);\r
-}, jalview.datamodel, "SequenceNode", jalview.datamodel.BinaryNode);\r
-Clazz.prepareFields (c$, function () {\r
-this.color = java.awt.Color.black;\r
-});\r
-Clazz.makeConstructor (c$, \r
-function (val, parent, dist, name) {\r
-Clazz.superConstructor (this, jalview.datamodel.SequenceNode, [val, parent, name]);\r
-this.dist = dist;\r
-}, "~O,jalview.datamodel.SequenceNode,~N,~S");\r
-Clazz.makeConstructor (c$, \r
-function (val, parent, name, dist, bootstrap, dummy) {\r
-Clazz.superConstructor (this, jalview.datamodel.SequenceNode, [val, parent, name]);\r
-this.dist = dist;\r
-this.bootstrap = bootstrap;\r
-this.dummy = dummy;\r
-}, "~O,jalview.datamodel.SequenceNode,~S,~N,~N,~B");\r
-Clazz.defineMethod (c$, "isDummy", \r
-function () {\r
-return this.dummy;\r
-});\r
-Clazz.defineMethod (c$, "isPlaceholder", \r
-function () {\r
-return this.placeholder;\r
-});\r
-Clazz.defineMethod (c$, "setDummy", \r
-function (newstate) {\r
-var oldstate = this.dummy;\r
-this.dummy = newstate;\r
-return oldstate;\r
-}, "~B");\r
-Clazz.defineMethod (c$, "setPlaceholder", \r
-function (Placeholder) {\r
-this.placeholder = Placeholder;\r
-}, "~B");\r
-Clazz.defineMethod (c$, "AscendTree", \r
-function () {\r
-var c = this;\r
-do {\r
-c = c.parent ();\r
-} while ((c != null) && c.dummy);\r
-return c;\r
-});\r
-Clazz.defineMethod (c$, "isSequenceLabel", \r
-function () {\r
-if (this.name != null && this.name.length > 0) {\r
-for (var c = 0, s = this.name.length; c < s; c++) {\r
-var q = this.name.charAt (c);\r
-if ('0' <= q && q <= '9') continue;\r
-return true;\r
-}\r
-}return false;\r
-});\r
-});\r
+Clazz.declarePackage ("jalview.datamodel");
+Clazz.load (["jalview.datamodel.BinaryNode", "java.awt.Color"], "jalview.datamodel.SequenceNode", null, function () {
+c$ = Clazz.decorateAsClass (function () {
+this.dist = 0;
+this.count = 0;
+this.height = 0;
+this.ycount = 0;
+this.color = null;
+this.dummy = false;
+this.placeholder = false;
+Clazz.instantialize (this, arguments);
+}, jalview.datamodel, "SequenceNode", jalview.datamodel.BinaryNode);
+Clazz.prepareFields (c$, function () {
+this.color = java.awt.Color.black;
+});
+Clazz.makeConstructor (c$, 
+function (val, parent, dist, name) {
+Clazz.superConstructor (this, jalview.datamodel.SequenceNode, [val, parent, name]);
+this.dist = dist;
+}, "~O,jalview.datamodel.SequenceNode,~N,~S");
+Clazz.makeConstructor (c$, 
+function (val, parent, name, dist, bootstrap, dummy) {
+Clazz.superConstructor (this, jalview.datamodel.SequenceNode, [val, parent, name]);
+this.dist = dist;
+this.bootstrap = bootstrap;
+this.dummy = dummy;
+}, "~O,jalview.datamodel.SequenceNode,~S,~N,~N,~B");
+Clazz.defineMethod (c$, "isDummy", 
+function () {
+return this.dummy;
+});
+Clazz.defineMethod (c$, "isPlaceholder", 
+function () {
+return this.placeholder;
+});
+Clazz.defineMethod (c$, "setDummy", 
+function (newstate) {
+var oldstate = this.dummy;
+this.dummy = newstate;
+return oldstate;
+}, "~B");
+Clazz.defineMethod (c$, "setPlaceholder", 
+function (Placeholder) {
+this.placeholder = Placeholder;
+}, "~B");
+Clazz.defineMethod (c$, "AscendTree", 
+function () {
+var c = this;
+do {
+c = c.parent ();
+} while ((c != null) && c.dummy);
+return c;
+});
+Clazz.defineMethod (c$, "isSequenceLabel", 
+function () {
+if (this.name != null && this.name.length > 0) {
+for (var c = 0, s = this.name.length; c < s; c++) {
+var q = this.name.charAt (c);
+if ('0' <= q && q <= '9') continue;
+return true;
+}
+}return false;
+});
+});