Merge branch 'master' of https://source.jalview.org/git/jalviewjs.git

[jalviewjs.git] / site / j2s / jalview / viewmodel / seqfeatures / FeatureRendererSettings.js

diff --git a/site/j2s/jalview/viewmodel/seqfeatures/FeatureRendererSettings.js b/site/j2s/jalview/viewmodel/seqfeatures/FeatureRendererSettings.js
index f166a1b..187a380 100644 (file)
--- a/site/j2s/jalview/viewmodel/seqfeatures/FeatureRendererSettings.js
+++ b/site/j2s/jalview/viewmodel/seqfeatures/FeatureRendererSettings.js
@@ -1,43 +1,43 @@
-Clazz.declarePackage ("jalview.viewmodel.seqfeatures");\r
-Clazz.load (null, "jalview.viewmodel.seqfeatures.FeatureRendererSettings", ["jalview.schemes.GraduatedColor", "java.util.Arrays", "java.util.concurrent.ConcurrentHashMap"], function () {\r
-c$ = Clazz.decorateAsClass (function () {\r
-this.renderOrder = null;\r
-this.featureGroups = null;\r
-this.featureColours = null;\r
-this.transparency = 0;\r
-this.featureOrder = null;\r
-Clazz.instantialize (this, arguments);\r
-}, jalview.viewmodel.seqfeatures, "FeatureRendererSettings", null, Cloneable);\r
-Clazz.makeConstructor (c$, \r
-function (renderOrder, featureGroups, featureColours, transparency, featureOrder) {\r
-this.renderOrder = java.util.Arrays.copyOf (renderOrder, renderOrder.length);\r
-this.featureGroups =  new java.util.concurrent.ConcurrentHashMap (featureGroups);\r
-this.featureColours =  new java.util.concurrent.ConcurrentHashMap (featureColours);\r
-this.transparency = transparency;\r
-this.featureOrder =  new java.util.concurrent.ConcurrentHashMap (featureOrder);\r
-}, "~A,java.util.Hashtable,java.util.Hashtable,~N,java.util.Hashtable");\r
-Clazz.makeConstructor (c$, \r
-function (fr) {\r
-this.renderOrder = null;\r
-this.featureGroups =  new java.util.concurrent.ConcurrentHashMap ();\r
-this.featureColours =  new java.util.concurrent.ConcurrentHashMap ();\r
-this.featureOrder =  new java.util.concurrent.ConcurrentHashMap ();\r
-if (fr.renderOrder != null) {\r
-this.renderOrder =  new Array (fr.renderOrder.length);\r
-System.arraycopy (fr.renderOrder, 0, this.renderOrder, 0, fr.renderOrder.length);\r
-}if (fr.featureGroups != null) {\r
-this.featureGroups =  new java.util.concurrent.ConcurrentHashMap (fr.featureGroups);\r
-}if (fr.featureColours != null) {\r
-this.featureColours =  new java.util.concurrent.ConcurrentHashMap (fr.featureColours);\r
-}var en = fr.featureColours.keySet ().iterator ();\r
-while (en.hasNext ()) {\r
-var next = en.next ();\r
-var val = this.featureColours.get (next);\r
-if (Clazz.instanceOf (val, jalview.schemes.GraduatedColor)) {\r
-this.featureColours.put (next,  new jalview.schemes.GraduatedColor (val));\r
-}}\r
-this.transparency = fr.transparency;\r
-if (fr.featureOrder != null) {\r
-this.featureOrder =  new java.util.concurrent.ConcurrentHashMap (fr.featureOrder);\r
-}}, "jalview.viewmodel.seqfeatures.FeatureRendererModel");\r
-});\r
+Clazz.declarePackage ("jalview.viewmodel.seqfeatures");
+Clazz.load (null, "jalview.viewmodel.seqfeatures.FeatureRendererSettings", ["jalview.schemes.GraduatedColor", "java.util.Arrays", "java.util.concurrent.ConcurrentHashMap"], function () {
+c$ = Clazz.decorateAsClass (function () {
+this.renderOrder = null;
+this.featureGroups = null;
+this.featureColours = null;
+this.transparency = 0;
+this.featureOrder = null;
+Clazz.instantialize (this, arguments);
+}, jalview.viewmodel.seqfeatures, "FeatureRendererSettings", null, Cloneable);
+Clazz.makeConstructor (c$, 
+function (renderOrder, featureGroups, featureColours, transparency, featureOrder) {
+this.renderOrder = java.util.Arrays.copyOf (renderOrder, renderOrder.length);
+this.featureGroups =  new java.util.concurrent.ConcurrentHashMap (featureGroups);
+this.featureColours =  new java.util.concurrent.ConcurrentHashMap (featureColours);
+this.transparency = transparency;
+this.featureOrder =  new java.util.concurrent.ConcurrentHashMap (featureOrder);
+}, "~A,java.util.Hashtable,java.util.Hashtable,~N,java.util.Hashtable");
+Clazz.makeConstructor (c$, 
+function (fr) {
+this.renderOrder = null;
+this.featureGroups =  new java.util.concurrent.ConcurrentHashMap ();
+this.featureColours =  new java.util.concurrent.ConcurrentHashMap ();
+this.featureOrder =  new java.util.concurrent.ConcurrentHashMap ();
+if (fr.renderOrder != null) {
+this.renderOrder =  new Array (fr.renderOrder.length);
+System.arraycopy (fr.renderOrder, 0, this.renderOrder, 0, fr.renderOrder.length);
+}if (fr.featureGroups != null) {
+this.featureGroups =  new java.util.concurrent.ConcurrentHashMap (fr.featureGroups);
+}if (fr.featureColours != null) {
+this.featureColours =  new java.util.concurrent.ConcurrentHashMap (fr.featureColours);
+}var en = fr.featureColours.keySet ().iterator ();
+while (en.hasNext ()) {
+var next = en.next ();
+var val = this.featureColours.get (next);
+if (Clazz.instanceOf (val, jalview.schemes.GraduatedColor)) {
+this.featureColours.put (next,  new jalview.schemes.GraduatedColor (val));
+}}
+this.transparency = fr.transparency;
+if (fr.featureOrder != null) {
+this.featureOrder =  new java.util.concurrent.ConcurrentHashMap (fr.featureOrder);
+}}, "jalview.viewmodel.seqfeatures.FeatureRendererModel");
+});