JAL-1807 - Bob's last(?) before leaving Dundee -- adds fast file loading

[jalviewjs.git] / src / jalview / schemes / TCoffeeColourScheme.java

diff --git a/src/jalview/schemes/TCoffeeColourScheme.java b/src/jalview/schemes/TCoffeeColourScheme.java
index 9e8feea..47261f6 100644 (file)
--- a/src/jalview/schemes/TCoffeeColourScheme.java
+++ b/src/jalview/schemes/TCoffeeColourScheme.java
@@ -26,7 +26,7 @@ import jalview.datamodel.AnnotatedCollectionI;
 import jalview.datamodel.Annotation;
 import jalview.datamodel.SequenceCollectionI;
 import jalview.datamodel.SequenceI;
-import jalview.jsdev.Constants;
+import jalview.jsdev.GenericFileAdapter;
 
 import java.awt.Color;
 import java.util.ArrayList;
@@ -91,7 +91,7 @@ public class TCoffeeColourScheme extends ResidueColourScheme
             : alignment.getContext();
     int w = 0;
     for (AlignmentAnnotation al : alcontext
-            .findAnnotation(Constants.TCOFFEE_SCORE))
+            .findAnnotation(GenericFileAdapter.TCOFFEE_SCORE))
     {
       if (al.sequenceRef != null && !al.belowAlignment)
       {
@@ -116,7 +116,7 @@ public class TCoffeeColourScheme extends ResidueColourScheme
   }
 
   @Override
-  public Color findColour(char c, int j, SequenceI seq)
+  public Color findColourSeq(char c, int j, SequenceI seq)
   {
     Color[] cols;