X-Git-Url: http://source.jalview.org/gitweb/?p=jalviewjs.git;a=blobdiff_plain;f=bin%2Fcom%2Fstevesoft%2Fpat%2FRegexReader.js;h=d767d8068257d9d5b5c33adb36444a5ada998fe7;hp=301d8e7f5ddbeaf8cd3b68213716ba05f90b48e4;hb=8ffd05b3abe52c0b6b79b011c0966361f82d5fe6;hpb=6154cb57a6eac3bb1344b8342495f5bb701ee921

diff --git a/bin/com/stevesoft/pat/RegexReader.js b/bin/com/stevesoft/pat/RegexReader.js
index 301d8e7..d767d80 100644
--- a/bin/com/stevesoft/pat/RegexReader.js
+++ b/bin/com/stevesoft/pat/RegexReader.js
@@ -1,164 +1,164 @@
-Clazz.declarePackage ("com.stevesoft.pat");
-Clazz.load (["java.io.Reader", "com.stevesoft.pat.PartialBuffer", "$.RBuffer", "java.lang.StringBuffer"], "com.stevesoft.pat.RegexReader", ["com.stevesoft.pat.StringBufferLike", "com.stevesoft.pat.wrap.StringBufferWrap"], function () {
-c$ = Clazz.decorateAsClass (function () {
-this.rb = null;
-this.wrap = null;
-this.moreToRead = true;
-this.r = null;
-this.rp = null;
-this.nmax = 2048;
-this.max_lines = 2;
-this.EOLchar = '\n';
-Clazz.instantialize (this, arguments);
-}, com.stevesoft.pat, "RegexReader", java.io.Reader);
-Clazz.prepareFields (c$, function () {
-this.rb =  new com.stevesoft.pat.RBuffer ( new StringBuffer ());
-this.wrap =  new com.stevesoft.pat.PartialBuffer (this.rb.sb);
-});
-Clazz.makeConstructor (c$, 
-function (rex, r) {
-Clazz.superConstructor (this, com.stevesoft.pat.RegexReader, []);
-this.r = r;
-this.rp = rex.getReplacer ();
-}, "com.stevesoft.pat.Regex,java.io.Reader");
-Clazz.makeConstructor (c$, 
-function (tex, r) {
-Clazz.superConstructor (this, com.stevesoft.pat.RegexReader, []);
-this.r = r;
-this.rp = tex.getReplacer ();
-}, "com.stevesoft.pat.Transformer,java.io.Reader");
-Clazz.defineMethod (c$, "reset", 
-function () {
-this.r.reset ();
-this.rb =  new com.stevesoft.pat.RBuffer ( new StringBuffer ());
-this.wrap =  new com.stevesoft.pat.PartialBuffer (this.rb.sb);
-this.moreToRead = true;
-});
-Clazz.defineMethod (c$, "readData", 
-function () {
-var c;
-var n = 0;
-while ((c = this.r.read ()) != -1) {
-this.rb.sb.append (String.fromCharCode (c));
-if (n++ > this.nmax) {
-break;
-}}
-if (c == -1 && n == 0) {
-this.moreToRead = false;
-this.wrap.allowOverRun = false;
-}});
-Clazz.defineMethod (c$, "getMoreData", 
-function () {
-while (this.rb.pos >= this.rb.epos) {
-this.wrap.overRun = false;
-if (this.rb.next != null) {
-this.rb = this.rb.next;
-} else if (this.rb.done) {
-break;
-} else if (this.rb.epos >= this.rb.sb.length () && this.rb.epos > this.nmax) {
-this.rb.pos = 1;
-this.rb.epos = 1;
-this.rb.sb.setLength (1);
-this.readData ();
-} else if (this.rb.epos >= this.rb.sb.length () && this.moreToRead) {
-this.readData ();
-} else if (this.rp.getRegex ().matchAtLike (this.wrap, this.rb.epos)) {
-if (this.wrap.overRun) {
-this.readData ();
-} else {
-var sbw =  new com.stevesoft.pat.wrap.StringBufferWrap ();
-var sbl =  new com.stevesoft.pat.StringBufferLike (sbw);
-var rex = this.rp.getRegex ();
-var npos = rex.matchedTo ();
-this.rp.setBuffer (sbl);
-this.rp.setSource (this.wrap);
-this.rp.setPos (npos);
-this.rp.apply (rex, rex.getReplaceRule ());
-var opos = this.rb.epos;
-var rb2 =  new com.stevesoft.pat.RBuffer (sbw.unwrap ());
-rb2.epos = rb2.sb.length ();
-var rb3 =  new com.stevesoft.pat.RBuffer (this.rb.sb);
-this.rb.next = rb2;
-rb2.next = rb3;
-if (npos == opos) {
-rb3.epos = npos + 1;
-if (rb3.epos > rb3.sb.length ()) {
-if (this.rb.pos >= this.rb.epos) {
-this.rb = this.rb.next;
-}rb3.pos = rb3.epos = 0;
-rb3.done = true;
-}rb3.pos = npos;
-} else {
-rb3.pos = rb3.epos = npos;
-}}} else {
-if (this.wrap.overRun) {
-this.readData ();
-} else if (this.rb.epos < this.rb.sb.length ()) {
-this.rb.epos++;
-} else {
-break;
-}}}
-});
-Clazz.defineMethod (c$, "read", 
-function () {
-if (this.rb.pos >= this.rb.epos) {
-this.getMoreData ();
-if (this.rb.pos >= this.rb.epos) {
-return -1;
-}}return this.rb.sb.charAt (this.rb.pos++);
-});
-Clazz.defineMethod (c$, "read", 
-function (buf, off, len) {
-var c = -1;
-var end = off + len;
-for (var i = off; i < end; i++) {
-c = this.read ();
-if (c < 0) {
-if (i == off) {
-return -1;
-}return i - off;
-}buf[i] = String.fromCharCode (c);
-}
-return len;
-}, "~A,~N,~N");
-Clazz.defineMethod (c$, "close", 
-function () {
-this.r.close ();
-});
-Clazz.overrideMethod (c$, "markSupported", 
-function () {
-return false;
-});
-Clazz.defineMethod (c$, "getBufferSize", 
-function () {
-return this.nmax;
-});
-Clazz.defineMethod (c$, "setBufferSize", 
-function (n) {
-this.nmax = n;
-}, "~N");
-Clazz.defineMethod (c$, "getMaxLines", 
-function () {
-return this.max_lines;
-});
-Clazz.defineMethod (c$, "setMaxLines", 
-function (ml) {
-this.max_lines = ml;
-}, "~N");
-Clazz.defineMethod (c$, "getEOLchar", 
-function () {
-return this.EOLchar;
-});
-Clazz.defineMethod (c$, "setEOLchar", 
-function (c) {
-this.EOLchar = c;
-}, "~S");
-Clazz.overrideMethod (c$, "skip", 
-function (d) {
-var n = 0;
-while (n < d && this.read () != -1) {
-n++;
-}
-return n;
-}, "~N");
-});
+Clazz.declarePackage ("com.stevesoft.pat");
+Clazz.load (["java.io.Reader", "com.stevesoft.pat.PartialBuffer", "$.RBuffer", "java.lang.StringBuffer"], "com.stevesoft.pat.RegexReader", ["com.stevesoft.pat.StringBufferLike", "com.stevesoft.pat.wrap.StringBufferWrap"], function () {
+c$ = Clazz.decorateAsClass (function () {
+this.rb = null;
+this.wrap = null;
+this.moreToRead = true;
+this.r = null;
+this.rp = null;
+this.nmax = 2048;
+this.max_lines = 2;
+this.EOLchar = '\n';
+Clazz.instantialize (this, arguments);
+}, com.stevesoft.pat, "RegexReader", java.io.Reader);
+Clazz.prepareFields (c$, function () {
+this.rb =  new com.stevesoft.pat.RBuffer ( new StringBuffer ());
+this.wrap =  new com.stevesoft.pat.PartialBuffer (this.rb.sb);
+});
+Clazz.makeConstructor (c$, 
+function (rex, r) {
+Clazz.superConstructor (this, com.stevesoft.pat.RegexReader, []);
+this.r = r;
+this.rp = rex.getReplacer ();
+}, "com.stevesoft.pat.Regex,java.io.Reader");
+Clazz.makeConstructor (c$, 
+function (tex, r) {
+Clazz.superConstructor (this, com.stevesoft.pat.RegexReader, []);
+this.r = r;
+this.rp = tex.getReplacer ();
+}, "com.stevesoft.pat.Transformer,java.io.Reader");
+Clazz.defineMethod (c$, "reset", 
+function () {
+this.r.reset ();
+this.rb =  new com.stevesoft.pat.RBuffer ( new StringBuffer ());
+this.wrap =  new com.stevesoft.pat.PartialBuffer (this.rb.sb);
+this.moreToRead = true;
+});
+Clazz.defineMethod (c$, "readData", 
+function () {
+var c;
+var n = 0;
+while ((c = this.r.read ()) != -1) {
+this.rb.sb.append (String.fromCharCode (c));
+if (n++ > this.nmax) {
+break;
+}}
+if (c == -1 && n == 0) {
+this.moreToRead = false;
+this.wrap.allowOverRun = false;
+}});
+Clazz.defineMethod (c$, "getMoreData", 
+function () {
+while (this.rb.pos >= this.rb.epos) {
+this.wrap.overRun = false;
+if (this.rb.next != null) {
+this.rb = this.rb.next;
+} else if (this.rb.done) {
+break;
+} else if (this.rb.epos >= this.rb.sb.length () && this.rb.epos > this.nmax) {
+this.rb.pos = 1;
+this.rb.epos = 1;
+this.rb.sb.setLength (1);
+this.readData ();
+} else if (this.rb.epos >= this.rb.sb.length () && this.moreToRead) {
+this.readData ();
+} else if (this.rp.getRegex ().matchAtLike (this.wrap, this.rb.epos)) {
+if (this.wrap.overRun) {
+this.readData ();
+} else {
+var sbw =  new com.stevesoft.pat.wrap.StringBufferWrap ();
+var sbl =  new com.stevesoft.pat.StringBufferLike (sbw);
+var rex = this.rp.getRegex ();
+var npos = rex.matchedTo ();
+this.rp.setBuffer (sbl);
+this.rp.setSource (this.wrap);
+this.rp.setPos (npos);
+this.rp.apply (rex, rex.getReplaceRule ());
+var opos = this.rb.epos;
+var rb2 =  new com.stevesoft.pat.RBuffer (sbw.unwrap ());
+rb2.epos = rb2.sb.length ();
+var rb3 =  new com.stevesoft.pat.RBuffer (this.rb.sb);
+this.rb.next = rb2;
+rb2.next = rb3;
+if (npos == opos) {
+rb3.epos = npos + 1;
+if (rb3.epos > rb3.sb.length ()) {
+if (this.rb.pos >= this.rb.epos) {
+this.rb = this.rb.next;
+}rb3.pos = rb3.epos = 0;
+rb3.done = true;
+}rb3.pos = npos;
+} else {
+rb3.pos = rb3.epos = npos;
+}}} else {
+if (this.wrap.overRun) {
+this.readData ();
+} else if (this.rb.epos < this.rb.sb.length ()) {
+this.rb.epos++;
+} else {
+break;
+}}}
+});
+Clazz.defineMethod (c$, "read", 
+function () {
+if (this.rb.pos >= this.rb.epos) {
+this.getMoreData ();
+if (this.rb.pos >= this.rb.epos) {
+return -1;
+}}return this.rb.sb.charAt (this.rb.pos++);
+});
+Clazz.defineMethod (c$, "read", 
+function (buf, off, len) {
+var c = -1;
+var end = off + len;
+for (var i = off; i < end; i++) {
+c = this.read ();
+if (c < 0) {
+if (i == off) {
+return -1;
+}return i - off;
+}buf[i] = String.fromCharCode (c);
+}
+return len;
+}, "~A,~N,~N");
+Clazz.defineMethod (c$, "close", 
+function () {
+this.r.close ();
+});
+Clazz.overrideMethod (c$, "markSupported", 
+function () {
+return false;
+});
+Clazz.defineMethod (c$, "getBufferSize", 
+function () {
+return this.nmax;
+});
+Clazz.defineMethod (c$, "setBufferSize", 
+function (n) {
+this.nmax = n;
+}, "~N");
+Clazz.defineMethod (c$, "getMaxLines", 
+function () {
+return this.max_lines;
+});
+Clazz.defineMethod (c$, "setMaxLines", 
+function (ml) {
+this.max_lines = ml;
+}, "~N");
+Clazz.defineMethod (c$, "getEOLchar", 
+function () {
+return this.EOLchar;
+});
+Clazz.defineMethod (c$, "setEOLchar", 
+function (c) {
+this.EOLchar = c;
+}, "~S");
+Clazz.overrideMethod (c$, "skip", 
+function (d) {
+var n = 0;
+while (n < d && this.read () != -1) {
+n++;
+}
+return n;
+}, "~N");
+});