X-Git-Url: http://source.jalview.org/gitweb/?p=jalviewjs.git;a=blobdiff_plain;f=site%2Fj2s%2Fjalview%2Fappletgui%2FAlignFrame.js;h=8439045ac127736c8820993a15606cefd5042ca9;hp=0d207b94a5aadfd04a3076704f0575e8f1e4961d;hb=36d803e4a1f98728e91e80de5fa0b95e0cadb0d4;hpb=5b669b6c1a4f1f29b178283a46bc22fcd66aabad

diff --git a/site/j2s/jalview/appletgui/AlignFrame.js b/site/j2s/jalview/appletgui/AlignFrame.js
index 0d207b9..8439045 100644
--- a/site/j2s/jalview/appletgui/AlignFrame.js
+++ b/site/j2s/jalview/appletgui/AlignFrame.js
@@ -1,5 +1,5 @@
 Clazz.declarePackage ("jalview.appletgui");
-Clazz.load (["awt2swing.Canvas", "jalview.api.AlignViewControllerGuiI", "jalview.appletgui.EmbmenuFrame", "java.awt.event.ActionListener", "$.ItemListener", "$.KeyListener", "awt2swing.CheckboxMenuItem", "$.Label", "$.Menu", "$.MenuBar", "$.MenuItem", "jalview.util.MessageManager", "java.awt.BorderLayout"], "jalview.appletgui.AlignFrame", ["awt2swing.Frame", "jalview.analysis.AlignmentSorter", "$.AnnotationSorter", "jalview.appletgui.AlignViewport", "$.AlignmentPanel", "$.AnnotationColourChooser", "$.AnnotationColumnChooser", "$.AppletJmol", "$.CutAndPasteTransfer", "$.FeatureSettings", "$.Finder", "$.FontChooser", "$.OverviewPanel", "$.PCAPanel", "$.PaintRefresher", "$.PairwiseAlignPanel", "$.RedundancyPanel", "$.SliderPanel", "$.TreePanel", "$.UserDefinedColours", "jalview.bin.JalviewLite", "jalview.commands.EditCommand", "$.OrderCommand", "$.RemoveGapColCommand", "$.RemoveGapsCommand", "$.SlideSequencesCommand", "$.TrimRegionCommand", "jalview.controller.AlignViewController", "jalview.datamodel.Alignment", "$.PDBEntry", "$.Sequence", "$.SequenceGroup", "jalview.io.AlignmentProperties", "$.AnnotationFile", "$.AppletFormatAdapter", "$.FeaturesFile", "jalview.jsdev.GenericFileAdapter", "jalview.schemes.Blosum62ColourScheme", "$.BuriedColourScheme", "$.ClustalxColourScheme", "$.HelixColourScheme", "$.HydrophobicColourScheme", "$.NucleotideColourScheme", "$.PIDColourScheme", "$.PurinePyrimidineColourScheme", "$.RNAHelicesColourChooser", "$.RNAInteractionColourScheme", "$.StrandColourScheme", "$.TCoffeeColourScheme", "$.TaylorColourScheme", "$.TurnColourScheme", "$.ZappoColourScheme", "jalview.structure.StructureSelectionManager", "jalview.util.Comparison", "$.MappingUtils", "java.awt.Color", "$.Font", "java.awt.event.FocusListener", "$.WindowAdapter", "java.lang.Character", "$.StringBuffer", "java.net.URL", "$.URLEncoder", "java.util.Arrays", "$.HashMap", "$.Hashtable", "$.StringTokenizer", "$.Vector"], function () {
+Clazz.load (["awt2swing.Canvas", "jalview.api.AlignViewControllerGuiI", "jalview.appletgui.EmbmenuFrame", "java.awt.event.ActionListener", "$.ItemListener", "$.KeyListener", "awt2swing.CheckboxMenuItem", "$.Label", "$.Menu", "$.MenuBar", "$.MenuItem", "jalview.util.MessageManager", "java.awt.BorderLayout"], "jalview.appletgui.AlignFrame", ["awt2swing.Frame", "$.Util", "jalview.analysis.AlignmentSorter", "$.AnnotationSorter", "jalview.appletgui.AlignViewport", "$.AlignmentPanel", "$.AnnotationColourChooser", "$.AnnotationColumnChooser", "$.AppletJmol", "$.CutAndPasteTransfer", "$.FeatureSettings", "$.Finder", "$.FontChooser", "$.OverviewPanel", "$.PCAPanel", "$.PaintRefresher", "$.PairwiseAlignPanel", "$.RedundancyPanel", "$.SliderPanel", "$.TreePanel", "$.UserDefinedColours", "jalview.bin.JalviewLite", "jalview.commands.EditCommand", "$.OrderCommand", "$.RemoveGapColCommand", "$.RemoveGapsCommand", "$.SlideSequencesCommand", "$.TrimRegionCommand", "jalview.controller.AlignViewController", "jalview.datamodel.Alignment", "$.PDBEntry", "$.Sequence", "$.SequenceGroup", "jalview.io.AlignmentProperties", "$.AnnotationFile", "$.AppletFormatAdapter", "$.FeaturesFile", "jalview.jsdev.GenericFileAdapter", "jalview.schemes.Blosum62ColourScheme", "$.BuriedColourScheme", "$.ClustalxColourScheme", "$.HelixColourScheme", "$.HydrophobicColourScheme", "$.NucleotideColourScheme", "$.PIDColourScheme", "$.PurinePyrimidineColourScheme", "$.RNAHelicesColourChooser", "$.RNAInteractionColourScheme", "$.StrandColourScheme", "$.TCoffeeColourScheme", "$.TaylorColourScheme", "$.TurnColourScheme", "$.ZappoColourScheme", "jalview.structure.StructureSelectionManager", "jalview.util.Comparison", "$.MappingUtils", "java.awt.Color", "$.Font", "java.awt.event.FocusListener", "$.WindowAdapter", "java.lang.Character", "$.StringBuffer", "java.net.URL", "$.URLEncoder", "java.util.Arrays", "$.HashMap", "$.Hashtable", "$.StringTokenizer", "$.Vector"], function () {
 c$ = Clazz.decorateAsClass (function () {
 this.avc = null;
 this.alignPanel = null;
@@ -2346,18 +2346,18 @@ var d = 5;
 var e = 7;
 a.setColor (java.awt.Color.black);
 a.setFont ( new java.awt.Font ("Helvetica", 1, 14));
-a.drawString (jalview.util.MessageManager.formatMessage ("label.jalviewLite_release",  Clazz.newArray (-1, [this.version])), e, d += c);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.formatMessage ("label.jalviewLite_release",  Clazz.newArray (-1, [this.version])), e, d += c);
 a.setFont ( new java.awt.Font ("Helvetica", 1, 12));
-a.drawString (jalview.util.MessageManager.formatMessage ("label.jaview_build_date",  Clazz.newArray (-1, [this.builddate])), e, d += c);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.formatMessage ("label.jaview_build_date",  Clazz.newArray (-1, [this.builddate])), e, d += c);
 a.setFont ( new java.awt.Font ("Helvetica", 0, 12));
-a.drawString (jalview.util.MessageManager.getString ("label.jalview_authors_1"), e, d += c * 1.5);
-a.drawString (jalview.util.MessageManager.getString ("label.jalview_authors_2"), e + 50, d += c + 8);
-a.drawString (jalview.util.MessageManager.getString ("label.jalview_dev_managers"), e, d += c);
-a.drawString (jalview.util.MessageManager.getString ("label.jalview_distribution_lists"), e, d += c);
-a.drawString (jalview.util.MessageManager.getString ("label.jalview_please_cite"), e, d += c + 8);
-a.drawString (jalview.util.MessageManager.getString ("label.jalview_cite_1_authors"), e, d += c);
-a.drawString (jalview.util.MessageManager.getString ("label.jalview_cite_1_title"), e, d += c);
-a.drawString (jalview.util.MessageManager.getString ("label.jalview_cite_1_ref"), e, d += c);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.getString ("label.jalview_authors_1"), e, d += c * 1.5);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.getString ("label.jalview_authors_2"), e + 50, d += c + 8);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.getString ("label.jalview_dev_managers"), e, d += c);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.getString ("label.jalview_distribution_lists"), e, d += c);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.getString ("label.jalview_please_cite"), e, d += c + 8);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.getString ("label.jalview_cite_1_authors"), e, d += c);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.getString ("label.jalview_cite_1_title"), e, d += c);
+awt2swing.Util.drawString (a, jalview.util.MessageManager.getString ("label.jalview_cite_1_ref"), e, d += c);
 }, "java.awt.Graphics");
 c$ = Clazz.p0p ();
 };