X-Git-Url: http://source.jalview.org/gitweb/?p=jalviewjs.git;a=blobdiff_plain;f=site%2Fj2s%2Fjalview%2Fdatamodel%2FAnnotation.js;h=76f42d8ca5514acd76ef908c8dedefe7e608c496;hp=92e1248fc092b1e4d292e3bda5d777929d3f5c31;hb=b9b7a352eee79b7764c3b09c9d19663075061d8c;hpb=8ffd05b3abe52c0b6b79b011c0966361f82d5fe6

diff --git a/site/j2s/jalview/datamodel/Annotation.js b/site/j2s/jalview/datamodel/Annotation.js
index 92e1248..76f42d8 100644
--- a/site/j2s/jalview/datamodel/Annotation.js
+++ b/site/j2s/jalview/datamodel/Annotation.js
@@ -1,72 +1,72 @@
-Clazz.declarePackage ("jalview.datamodel");
-Clazz.load (null, "jalview.datamodel.Annotation", ["java.lang.Float", "$.StringBuffer"], function () {
-c$ = Clazz.decorateAsClass (function () {
-this.displayCharacter = "";
-this.description = "";
-this.secondaryStructure = ' ';
-this.value = 0;
-this.colour = null;
-Clazz.instantialize (this, arguments);
-}, jalview.datamodel, "Annotation");
-Clazz.makeConstructor (c$, 
-function (displayChar, desc, ss, val) {
-this.displayCharacter = displayChar;
-this.description = desc;
-this.secondaryStructure = ss;
-this.value = val;
-}, "~S,~S,~S,~N");
-Clazz.makeConstructor (c$, 
-function (displayChar, desc, ss, val, colour) {
-this.construct (displayChar, desc, ss, val);
-this.colour = colour;
-}, "~S,~S,~S,~N,java.awt.Color");
-Clazz.makeConstructor (c$, 
-function (that) {
-if (that == null || this === that) {
-return;
-}if (that.displayCharacter != null) this.displayCharacter =  String.instantialize (that.displayCharacter);
-if (that.description != null) this.description =  String.instantialize (that.description);
-this.secondaryStructure = that.secondaryStructure;
-this.value = that.value;
-this.colour = that.colour;
-}, "jalview.datamodel.Annotation");
-Clazz.makeConstructor (c$, 
-function (val) {
-this.construct (null, null, ' ', val, null);
-}, "~N");
-Clazz.overrideMethod (c$, "toString", 
-function () {
-var sb =  new StringBuffer ();
-if (this.displayCharacter != null) {
-sb.append ("\'");
-sb.append (this.displayCharacter);
-sb.append ("\'");
-}{
-sb.append (",");
-}if (this.secondaryStructure.charCodeAt (0) != 0 && !("" + this.displayCharacter).equals ("" + this.secondaryStructure)) {
-sb.append ("\'");
-sb.append (this.secondaryStructure);
-sb.append ("\'");
-}{
-sb.append (",");
-}if (this.description != null && this.description.length > 0) {
-sb.append ("\"");
-sb.append (this.description);
-sb.append ("\"");
-}{
-sb.append (",");
-}if (!Float.isNaN (this.value)) {
-sb.append (this.value);
-}if (this.colour != null) {
-if (sb.length () > 0) {
-sb.append (",");
-}sb.append ("[");
-sb.append (this.colour.getRed ());
-sb.append (",");
-sb.append (this.colour.getGreen ());
-sb.append (",");
-sb.append (this.colour.getBlue ());
-sb.append ("]");
-}return sb.toString ();
-});
-});
+Clazz.declarePackage ("jalview.datamodel");
+Clazz.load (null, "jalview.datamodel.Annotation", ["java.lang.Float", "$.StringBuffer"], function () {
+c$ = Clazz.decorateAsClass (function () {
+this.displayCharacter = "";
+this.description = "";
+this.secondaryStructure = ' ';
+this.value = 0;
+this.colour = null;
+Clazz.instantialize (this, arguments);
+}, jalview.datamodel, "Annotation");
+Clazz.makeConstructor (c$, 
+function (displayChar, desc, ss, val) {
+this.displayCharacter = displayChar;
+this.description = desc;
+this.secondaryStructure = ss;
+this.value = val;
+}, "~S,~S,~S,~N");
+Clazz.makeConstructor (c$, 
+function (displayChar, desc, ss, val, colour) {
+this.construct (displayChar, desc, ss, val);
+this.colour = colour;
+}, "~S,~S,~S,~N,java.awt.Color");
+Clazz.makeConstructor (c$, 
+function (that) {
+if (that == null || this === that) {
+return;
+}if (that.displayCharacter != null) this.displayCharacter =  String.instantialize (that.displayCharacter);
+if (that.description != null) this.description =  String.instantialize (that.description);
+this.secondaryStructure = that.secondaryStructure;
+this.value = that.value;
+this.colour = that.colour;
+}, "jalview.datamodel.Annotation");
+Clazz.makeConstructor (c$, 
+function (val) {
+this.construct (null, null, ' ', val, null);
+}, "~N");
+Clazz.overrideMethod (c$, "toString", 
+function () {
+var sb =  new StringBuffer ();
+if (this.displayCharacter != null) {
+sb.append ("\'");
+sb.append (this.displayCharacter);
+sb.append ("\'");
+}{
+sb.append (",");
+}if (this.secondaryStructure.charCodeAt (0) != 0 && !("" + this.displayCharacter).equals ("" + this.secondaryStructure)) {
+sb.append ("\'");
+sb.append (this.secondaryStructure);
+sb.append ("\'");
+}{
+sb.append (",");
+}if (this.description != null && this.description.length > 0) {
+sb.append ("\"");
+sb.append (this.description);
+sb.append ("\"");
+}{
+sb.append (",");
+}if (!Float.isNaN (this.value)) {
+sb.append (this.value);
+}if (this.colour != null) {
+if (sb.length () > 0) {
+sb.append (",");
+}sb.append ("[");
+sb.append ("" + this.colour.getRed ());
+sb.append (",");
+sb.append ("" + this.colour.getGreen ());
+sb.append (",");
+sb.append ("" + this.colour.getBlue ());
+sb.append ("]");
+}return sb.toString ();
+});
+});