X-Git-Url: http://source.jalview.org/gitweb/?p=jalviewjs.git;a=blobdiff_plain;f=site%2Fj2s%2Fjalview%2Fjsdev%2FGenericFileAdapter.js;h=6df0a9f5e03039b9501c3014aed1184da551b1ba;hp=de5baed025a55957fe605bbace2f537ae090772c;hb=b9b7a352eee79b7764c3b09c9d19663075061d8c;hpb=7301a2415adab88038b291fc54caeeb3a5a47a44

diff --git a/site/j2s/jalview/jsdev/GenericFileAdapter.js b/site/j2s/jalview/jsdev/GenericFileAdapter.js
index de5baed..6df0a9f 100644
--- a/site/j2s/jalview/jsdev/GenericFileAdapter.js
+++ b/site/j2s/jalview/jsdev/GenericFileAdapter.js
@@ -1,85 +1,85 @@
-Clazz.declarePackage ("jalview.jsdev");
-Clazz.load (["jalview.io.AlignFile"], "jalview.jsdev.GenericFileAdapter", ["jalview.datamodel.AlignmentI", "jalview.io.FileParse", "java.io.BufferedReader", "$.InputStreamReader", "java.net.URL"], function () {
-c$ = Clazz.declareType (jalview.jsdev, "GenericFileAdapter", jalview.io.AlignFile);
-c$.getFile = Clazz.defineMethod (c$, "getFile", 
-function (fileType, params) {
-var cl = null;
-try {
-cl = Clazz._4Name ("jalview.io." + fileType);
-} catch (e) {
-if (Clazz.exceptionOf (e, ClassNotFoundException)) {
-System.err.println ("did not find file jalview.io." + fileType);
-return null;
-} else {
-throw e;
-}
-}
-var m;
-var ex = null;
-try {
-switch (params.length) {
-case 0:
-return cl.newInstance ();
-case 1:
-m = (Clazz.instanceOf (params[0], jalview.io.FileParse) ? cl.getConstructor ([jalview.io.FileParse]) : cl.getConstructor ([jalview.datamodel.AlignmentI]));
-break;
-case 2:
-m = cl.getConstructor ([String, String]);
-break;
-default:
-return null;
-}
-return m.newInstance (params);
-} catch (e$$) {
-if (Clazz.exceptionOf (e$$, InstantiationException)) {
-var e = e$$;
-{
-ex = e;
-}
-} else if (Clazz.exceptionOf (e$$, IllegalAccessException)) {
-var e = e$$;
-{
-ex = e;
-}
-} else if (Clazz.exceptionOf (e$$, NoSuchMethodException)) {
-var e = e$$;
-{
-ex = e;
-}
-} else if (Clazz.exceptionOf (e$$, SecurityException)) {
-var e = e$$;
-{
-ex = e;
-}
-} else if (Clazz.exceptionOf (e$$, IllegalArgumentException)) {
-var e = e$$;
-{
-ex = e;
-}
-} else if (Clazz.exceptionOf (e$$, java.lang.reflect.InvocationTargetException)) {
-var e = e$$;
-{
-ex = e;
-}
-} else {
-throw e$$;
-}
-}
-if (ex != null) {
-System.err.println ("Error in GenericFileAdapter: " + ex);
-{
-alert(ex)
-}}return null;
-}, "~S,~A");
-c$.isJS = Clazz.defineMethod (c$, "isJS", 
-function () {
-{
-return true;
-}});
-c$.getReader = Clazz.defineMethod (c$, "getReader", 
-function (fileName, forceURL) {
-if (!forceURL && !jalview.jsdev.GenericFileAdapter.isJS ()) return  new java.io.BufferedReader ( new java.io.FileReader (fileName));
-if (fileName.indexOf ("//") < 0) fileName = "file://" + fileName;
-return  new java.io.BufferedReader ( new java.io.InputStreamReader ( new java.net.URL (fileName).openStream ()));
-}, "~S,~B");
-});
+Clazz.declarePackage ("jalview.jsdev");
+Clazz.load (["jalview.io.AlignFile"], "jalview.jsdev.GenericFileAdapter", ["jalview.datamodel.AlignmentI", "jalview.io.FileParse", "java.io.BufferedReader", "$.InputStreamReader", "java.net.URL"], function () {
+c$ = Clazz.declareType (jalview.jsdev, "GenericFileAdapter", jalview.io.AlignFile);
+c$.getFile = Clazz.defineMethod (c$, "getFile", 
+function (fileType, params) {
+var cl = null;
+try {
+cl = Clazz._4Name ("jalview.io." + fileType);
+} catch (e) {
+if (Clazz.exceptionOf (e, ClassNotFoundException)) {
+System.err.println ("did not find file jalview.io." + fileType);
+return null;
+} else {
+throw e;
+}
+}
+var m;
+var ex = null;
+try {
+switch (params.length) {
+case 0:
+return cl.newInstance ();
+case 1:
+m = (Clazz.instanceOf (params[0], jalview.io.FileParse) ? cl.getConstructor ([jalview.io.FileParse]) : cl.getConstructor ([jalview.datamodel.AlignmentI]));
+break;
+case 2:
+m = cl.getConstructor ([String, String]);
+break;
+default:
+return null;
+}
+return m.newInstance (params);
+} catch (e$$) {
+if (Clazz.exceptionOf (e$$, InstantiationException)) {
+var e = e$$;
+{
+ex = e;
+}
+} else if (Clazz.exceptionOf (e$$, IllegalAccessException)) {
+var e = e$$;
+{
+ex = e;
+}
+} else if (Clazz.exceptionOf (e$$, NoSuchMethodException)) {
+var e = e$$;
+{
+ex = e;
+}
+} else if (Clazz.exceptionOf (e$$, SecurityException)) {
+var e = e$$;
+{
+ex = e;
+}
+} else if (Clazz.exceptionOf (e$$, IllegalArgumentException)) {
+var e = e$$;
+{
+ex = e;
+}
+} else if (Clazz.exceptionOf (e$$, java.lang.reflect.InvocationTargetException)) {
+var e = e$$;
+{
+ex = e;
+}
+} else {
+throw e$$;
+}
+}
+if (ex != null) {
+System.err.println ("Error in GenericFileAdapter: " + ex);
+{
+alert(ex)
+}}return null;
+}, "~S,~A");
+c$.isJS = Clazz.defineMethod (c$, "isJS", 
+function () {
+{
+return true;
+}});
+c$.getReader = Clazz.defineMethod (c$, "getReader", 
+function (fileName, forceURL) {
+if (!forceURL && !jalview.jsdev.GenericFileAdapter.isJS ()) return  new java.io.BufferedReader ( new java.io.FileReader (fileName));
+if (fileName.indexOf ("//") < 0) fileName = "file://" + fileName;
+return  new java.io.BufferedReader ( new java.io.InputStreamReader ( new java.net.URL (fileName).openStream ()));
+}, "~S,~B");
+});