2 *Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3 *Copyright (C) $$Year-Rel$$ The Jalview Authors
5 *This file is part of Jalview.
7 *Jalview is free software: you can redistribute it and/or
8 *modify it under the terms of the GNU General Public License
9 *as published by the Free Software Foundation, either version 3
10 *of the License, or (at your option) any later version.
12 *Jalview is distributed in the hope that it will be useful, but
13 *WITHOUT ANY WARRANTY; without even the implied warranty
14 *of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15 *PURPOSE. See the GNU General Public License for more details.
17 *You should have received a copy of the GNU General Public License
18 *along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19 *The Jalview Authors are detailed in the 'AUTHORS' file.
21 <!DOCTYPE html SYSTEM "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
23 * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
24 * Copyright (C) $$Year-Rel$$ The Jalview Authors
26 * This file is part of Jalview.
28 * Jalview is free software: you can redistribute it and/or
29 * modify it under the terms of the GNU General Public License
30 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
32 * Jalview is distributed in the hope that it will be useful, but
33 * WITHOUT ANY WARRANTY; without even the implied warranty
34 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
35 * PURPOSE. See the GNU General Public License for more details.
37 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
38 * The Jalview Authors are detailed in the 'AUTHORS' file.
40 <html xmlns="http://www.w3.org/1999/xhtml">
41 <head>Developing Jalview</head>
43 <p><h1>Developing Jalview</h1>
46 <li>Basic Source Structure Guidelines</li>
47 <li>The Applet and The Application - whats the difference ?</li>
48 <li>Package Architecture<br>
50 <li>Specific Development Guidelines
52 <li><a href="newdmobj.html">Adding new datamodel objects to Jalview</a></li>
53 <li>Adding new IO capabilities to Jalview</li>
54 <li>Adding new database types to Jalview</li>
55 <li>Working with the Jalview DAS annotation fetcher</li>
56 <li>Adding new analysis methods to jalview</li>
57 <li>Adding new web service functionality to jalview</li>