Updated images
[jalview.git] / help / html / misc / aminoAcids.html
1 <html>\r
2 <head><title>Amino Acids</title>\r
3 <style type="text/css">\r
4 <!--\r
5 td {\r
6         text-align: center;\r
7         background-color: FFFFEE;\r
8 }\r
9 -->\r
10 </style>\r
11 </head>\r
12 \r
13 <body>\r
14 \r
15 \r
16 <div align="center">\r
17   <table width="450" BORDER ="5" cellpadding="3" BGCOLOR="#FFFFFF">\r
18     <tr> \r
19       <td width="15">A</td>\r
20       <td width="25">Ala</td>\r
21       <td width="90">Alanine</td>\r
22       <td width="80">aliphatic<br>\r
23         hydrophobic<br>\r
24         neutral </td>\r
25       <td width="43" valign="middle">GCT<br>\r
26         GCC<br>\r
27         GCA<br>\r
28         GCG</td>\r
29       <td width="125"><img src="ala.jpg" width="94" height="81"></td>\r
30     </tr>\r
31     <tr> \r
32       <td>B</td>\r
33       <td>&nbsp;</td>\r
34       <td>either aspartic acid or asparagine</td>\r
35       <td>&nbsp;</td>\r
36       <td>&nbsp;</td>\r
37       <td>&nbsp;</td>\r
38     </tr>\r
39     <tr> \r
40       <td>C</td>\r
41       <td>Cys</td>\r
42       <td>Cysteine</td>\r
43       <td>polar<br>\r
44         hydrophobic<br>\r
45         neutral </td>\r
46       <td>TGT<br>\r
47         TGC</td>\r
48       <td><img src="cys.jpg" width="82" height="95"></td>\r
49     </tr>\r
50     <tr> \r
51       <td>D</td>\r
52       <td>Asp</td>\r
53       <td>Aspartic Acid</td>\r
54       <td>polar<br>\r
55         hydrophilic<br>\r
56         charged (-) </td>\r
57       <td>GAT<br>\r
58         GAC</td>\r
59       <td><img src="aspartate.jpg" width="95" height="103"></td>\r
60     </tr>\r
61     <tr> \r
62       <td>E</td>\r
63       <td>Glu</td>\r
64       <td>Glutamic Acid</td>\r
65       <td>polar<br>\r
66         hydrophilic<br>\r
67         charged (-) </td>\r
68       <td>GAA<br>\r
69         GAG</td>\r
70       <td><img src="glutamate.jpg" width="93" height="128"></td>\r
71     </tr>\r
72     <tr> \r
73       <td>F</td>\r
74       <td>Phe</td>\r
75       <td>Phenylalanine</td>\r
76       <td>aromatic<br>\r
77         hydrophobic<br>\r
78         neutral</td>\r
79       <td>TTT<br>\r
80         TTC</td>\r
81       <td><img src="phe.jpg" width="87" height="134"></td>\r
82     </tr>\r
83     <tr> \r
84       <td>G</td>\r
85       <td>Gly</td>\r
86       <td>Glycine</td>\r
87       <td>&nbsp;</td>\r
88       <td>GGT<br>\r
89         GGC<br>\r
90         GGA<br>\r
91         GGG</td>\r
92       <td><img src="gly.jpg" width="97" height="79"></td>\r
93     </tr>\r
94     <tr> \r
95       <td>H</td>\r
96       <td>His</td>\r
97       <td>Histidine</td>\r
98       <td>aromatic<br>\r
99         polar<br>\r
100         hydrophilic<br>\r
101         charged (+) </td>\r
102       <td>CAT<br>\r
103         CAC</td>\r
104       <td><img src="his.jpg" width="97" height="142"></td>\r
105     </tr>\r
106     <tr> \r
107       <td>I</td>\r
108       <td>Ile</td>\r
109       <td>Isoleucine</td>\r
110       <td>aliphatic<br>\r
111         hydrophobic<br>\r
112         neutral </td>\r
113       <td>ATT<br>\r
114         ATC<br>\r
115         ATA</td>\r
116       <td><img src="iso.jpg" width="101" height="125"></td>\r
117     </tr>\r
118     <tr> \r
119       <td>K</td>\r
120       <td>Lys</td>\r
121       <td>Lysine</td>\r
122       <td>&nbsp;</td>\r
123       <td>AAA<br>\r
124         AAG</td>\r
125       <td><img src="lys.jpg" width="79" height="167"></td>\r
126     </tr>\r
127     <tr> \r
128       <td>L</td>\r
129       <td>Leu</td>\r
130       <td>Leucine</td>\r
131       <td>aliphatic<br>\r
132         hydrophobic<br>\r
133         neutral </td>\r
134       <td>TTG<br>\r
135         TTA<br>\r
136         CTT<br>\r
137         CTC<br>\r
138         CTA<br>\r
139         CTG</td>\r
140       <td><img src="leu.jpg" width="97" height="120"></td>\r
141     </tr>\r
142     <tr> \r
143       <td>M</td>\r
144       <td>Met</td>\r
145       <td>Methionine</td>\r
146       <td>hydrophobic<br>\r
147         neutral </td>\r
148       <td>ATG</td>\r
149       <td><img src="met.jpg" width="86" height="151"></td>\r
150     </tr>\r
151     <tr> \r
152       <td>N</td>\r
153       <td>Asn</td>\r
154       <td>Asparagine</td>\r
155       <td>polar<br>\r
156         hydrophilic<br>\r
157         neutral </td>\r
158       <td>AAT<br>\r
159         AAC</td>\r
160       <td><img src="asparagine.jpg" width="84" height="116"></td>\r
161     </tr>\r
162     <tr> \r
163       <td>P</td>\r
164       <td>Pro</td>\r
165       <td>Proline</td>\r
166       <td>hydrophobic<br>\r
167         neutral</td>\r
168       <td>CCT<br>\r
169         CCC<br>\r
170         CCA<br>\r
171         CCG</td>\r
172       <td><img src="pro.jpg" width="101" height="90"></td>\r
173     </tr>\r
174     <tr> \r
175       <td>Q</td>\r
176       <td>Gln</td>\r
177       <td>Glutamine</td>\r
178       <td>polar<br>\r
179         hydrophilic<br>\r
180         neutral</td>\r
181       <td>CAA<br>\r
182         CAG</td>\r
183       <td><img src="glutamine.jpg" width="81" height="137"></td>\r
184     </tr>\r
185     <tr> \r
186       <td>R</td>\r
187       <td>Arg</td>\r
188       <td>Arginine</td>\r
189       <td>polar<br>\r
190         hydrophilic<br>\r
191         charged (+) </td>\r
192       <td>CGT<br>\r
193         CGC<br>\r
194         CGA<br>\r
195         CGG<br>\r
196         AGA<br>\r
197         AGG</td>\r
198       <td><img src="arg.jpg" width="95" height="187"></td>\r
199     </tr>\r
200     <tr> \r
201       <td>S</td>\r
202       <td>Ser</td>\r
203       <td>Serine</td>\r
204       <td>polar<br>\r
205         hydrophilic<br>\r
206         neutral </td>\r
207       <td>TCT<br>\r
208         TCC<br>\r
209         TCA<br>\r
210         TCG<br>\r
211         AGT<br>\r
212         AGC</td>\r
213       <td><img src="ser.jpg" width="96" height="74"></td>\r
214     </tr>\r
215     <tr> \r
216       <td>T</td>\r
217       <td>Thr</td>\r
218       <td>Threonine</td>\r
219       <td>polar<br>\r
220         hydrophilic<br>\r
221         neutral </td>\r
222       <td>ACT<br>\r
223         ACC<br>\r
224         ACA<br>\r
225         ACG</td>\r
226       <td><img src="thr.jpg" width="94" height="96"></td>\r
227     </tr>\r
228     <tr> \r
229       <td>V</td>\r
230       <td>Val</td>\r
231       <td>Valine</td>\r
232       <td>aliphatic<br>\r
233         hydrophobic<br>\r
234         neutral </td>\r
235       <td>GTT<br>\r
236         GTC<br>\r
237         GTA<br>\r
238         GTG</td>\r
239       <td><img src="val.jpg" width="99" height="98"></td>\r
240     </tr>\r
241     <tr> \r
242       <td>W</td>\r
243       <td>Trp</td>\r
244       <td>Tryptophan</td>\r
245       <td>aromatic<br>\r
246         hydrophobic<br>\r
247         neutral</td>\r
248       <td>TGG</td>\r
249       <td><img src="tryp.jpg" width="106" height="173"></td>\r
250     </tr>\r
251     <tr> \r
252       <td>X</td>\r
253       <td>&nbsp;</td>\r
254       <td>UNKNOWN</td>\r
255       <td>&nbsp;</td>\r
256       <td>&nbsp;</td>\r
257       <td>&nbsp;</td>\r
258     </tr>\r
259     <tr> \r
260       <td>Y</td>\r
261       <td>Tyr</td>\r
262       <td>Tyrosine</td>\r
263       <td>aromatic<br>\r
264         polar<br>\r
265         hydrophobic </td>\r
266       <td>TAT<br>\r
267         TAC</td>\r
268       <td><img src="tyr.jpg" width="85" height="152"></td>\r
269     </tr>\r
270     <tr> \r
271       <td>Z</td>\r
272       <td>&nbsp;</td>\r
273       <td>either glutamic acid or glutamine</td>\r
274       <td>&nbsp;</td>\r
275       <td>&nbsp;</td>\r
276       <td>&nbsp;</td>\r
277     </tr>\r
278     <tr> \r
279       <td>&nbsp;</td>\r
280       <td>End</td>\r
281       <td>Terminator</td>\r
282       <td>&nbsp;</td>\r
283       <td>TAA<br>\r
284         TAG<br>\r
285         TGA</td>\r
286       <td>&nbsp;</td>\r
287     </tr>\r
288   </table>\r
289   </div>\r
290 </body>\r
291 </html>\r