3 import java.io.IOException;
5 public interface FileFormatI
8 AlignmentFileI getAlignmentFile(String inFile, DataSourceType sourceType)
11 AlignmentFileI getAlignmentFile(FileParse source) throws IOException;
13 AlignmentFileI getAlignmentFile();
15 boolean isComplexAlignFile();
17 String getShortDescription();
20 * Returns a comma-separated list of file extensions associated with the
25 String getExtensions();