src/jalview/io/PDBFeatureSettings.java

   1 package jalview.io;
   2
   3 import jalview.api.FeatureColourI;
   4 import jalview.schemes.FeatureColourAdapter;
   5 import jalview.schemes.FeatureSettingsAdapter;
   6 import jalview.ws.dbsources.Pdb;
   7
   8 import java.awt.Color;
   9
  10 public class PDBFeatureSettings extends FeatureSettingsAdapter
  11 {
  12
  13   @Override
  14   public boolean isFeatureDisplayed(String type)
  15   {
  16     return type.equalsIgnoreCase(Pdb.FEATURE_INSERTION)
  17             || type.equalsIgnoreCase(Pdb.FEATURE_RES_NUM);
  18   }
  19
  20   @Override
  21   public FeatureColourI getFeatureColour(String type)
  22   {
  23     if (type.equalsIgnoreCase(Pdb.FEATURE_INSERTION))
  24     {
  25       return new FeatureColourAdapter()
  26       {
  27
  28         @Override
  29         public Color getColour()
  30         {
  31           return Color.RED;
  32         }
  33       };
  34     }
  35     return null;
  36   }
  37
  38   /**
  39    * Order to render insertion after ResNum
  40    */
  41   @Override
  42   public int compare(String feature1, String feature2)
  43   {
  44     if (feature1.equalsIgnoreCase(Pdb.FEATURE_INSERTION))
  45     {
  46       return +1;
  47     }
  48     if (feature2.equalsIgnoreCase(Pdb.FEATURE_INSERTION))
  49     {
  50       return -1;
  51     }
  52     if (feature1.equalsIgnoreCase(Pdb.FEATURE_RES_NUM))
  53     {
  54       return +1;
  55     }
  56     if (feature2.equalsIgnoreCase(Pdb.FEATURE_RES_NUM))
  57     {
  58       return -1;
  59     }
  60     return 0;
  61   }
  62 }
  63