+task sourceDist (type: Tar) {
+
+ def VERSION_UNDERSCORES = JALVIEW_VERSION.replaceAll("\\.", "_")
+ archiveFileName = project.name + "_" + VERSION_UNDERSCORES + ".tar.gz"
+
+ compression Compression.GZIP
+
+ into project.name
+
+ def EXCLUDE_FILES=["bin/*","test-*","clover*/*"
+ ,".*"
+ ,"**/.*"
+ ,"*.class"
+ ,"**/*.class","$j11modDir/**/*.jar","appletlib","**/*locales"
+ ,"*locales/**",
+ ,"utils/InstallAnywhere"]
+ def PROCESS_FILES=[ "AUTHORS",
+ "CITATION",
+ "FEATURETODO",
+ "JAVA-11-README",
+ "FEATURETODO",
+ "LICENSE",
+ "README",
+ "RELEASE",
+ "THIRDPARTYLIBS",
+ "build.gradle",
+ "gradle.properties",
+ "**/*.java",
+ "**/*.html",
+ "**/*.xml",
+ "**/*.gradle",
+ "**/*.groovy",
+ "**/*.properties",
+ "**/*.perl",
+ "**/*.sh"]
+
+ from(jalviewDir) {
+ exclude (EXCLUDE_FILES)
+ include (PROCESS_FILES)
+ filter(ReplaceTokens, beginToken: '$$', endToken: '$$', tokens: ['Version-Rel': JALVIEW_VERSION,'Year-Rel': getDate("yyyy")])
+ }
+ from(jalviewDir) {
+ exclude (EXCLUDE_FILES)
+ exclude (PROCESS_FILES)
+ include (eclipse_extra_jdt_prefs_file)
+ include ("$schemaDir/**/*")
+ include ("$utilsDir/**/*")
+ include ("$docDir/**/*")
+ include ("$examplesDir/**/*")
+ include ("getdown/**/*")
+
+ include ("$sourceDir/**/*.cdr")
+ include ("$j8libDir/**/*.jar")
+ include ("$j11libDir/**/*.jar")
+ include ("$resourceDir/**/*")
+
+ //include ("jalview-jalopy.xml")
+ //include ("JalviewApplet.jpx")
+ //include ("JalviewX.jpx")
+ //include ("nbbuild.xml")
+ //include ("nbproject/genfiles.properties")
+ //include ("nbproject/project.properties")
+ //include ("nbproject/project.xml")
+
+ include ("$helpDir/**/*")
+ exclude ("$helpDir/**/*.html")
+
+ exclude ("appletlib")
+ exclude ("**/*locales")
+ exclude ("*locales/**")
+ exclude ("utils/InstallAnywhere")
+ exclude (libDir)
+ exclude (getdown_files_dir)
+ exclude (getdown_website_dir)
+
+ // exluding these as not using jars as modules yet
+ exclude ("$j11modDir/**/*.jar")
+}
+}
+
+task helppages {
+ dependsOn copyHelp
+ dependsOn pubhtmlhelp
+
+ inputs.dir("$classes/$helpDir")
+ outputs.dir("$helpOutputDir")
+}