- <li>
- <!-- JAL-247 -->Hidden sequence markers and representative
- sequence bolding included when exporting alignment as EPS,
- SVG, PNG or HTML. <em>Display of these can be
- configured via the Format menu or in batch mode with a
- jalview properties file.</em>
- </li>
- <li>
- <!-- JAL-3003 -->Alignment is black in exported EPS file
- when sequences are selected in exported view.</em>
- </li>
- <li>
- <!-- JAL-3059 -->Groups with different coloured borders
- aren't rendered with correct colour.
- </li>
- </ul>
+ <li>
+ <!-- JAL-3087 -->Corrupted display when switching to
+ wrapped mode when sequence panel's vertical scrollbar is
+ visible.
+ </li>
+ <li>
+ <!-- JAL-3003 -->Alignment is black in exported EPS file
+ when sequences are selected in exported view.</em>
+ </li>
+ <li>
+ <!-- JAL-3059 -->Groups with different coloured borders
+ aren't rendered with correct colour.
+ </li>
+ <li>
+ <!-- JAL-3092 -->Jalview could hang when importing certain
+ types of knotted RNA secondary structure
+ </li>
+ <li>
+ <!-- JAL-3095 -->Sequence highlight and selection in
+ trimmed VARNA 2D structure is incorrect for sequences that
+ do not start at 1
+ </li>
+ <li>
+ <!-- JAL-3061 -->'.' inserted into RNA secondary structure
+ annotation when columns are inserted into an alignment,
+ and when exporting as Stockolm flatfile.
+ </li>
+ <li>
+ <!-- JAL-3053 -->Jalview annotation rows containing upper
+ and lower-case 'E' and 'H' do not automatically get
+ treated as RNA secondary structure
+ </li>
+ </ul>