git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
merge
[jalview.git]
/
src
/
MCview
/
Atom.java
diff --git
a/src/MCview/Atom.java
b/src/MCview/Atom.java
index
894984a
..
68a7c21
100755
(executable)
--- a/
src/MCview/Atom.java
+++ b/
src/MCview/Atom.java
@@
-20,6
+20,8
@@
*/
package MCview;
*/
package MCview;
+import jalview.schemes.ResidueProperties;
+
import java.awt.Color;
public class Atom
import java.awt.Color;
public class Atom
@@
-73,6
+75,8
@@
public class Atom
name = str.substring(12, 15).trim();
resName = str.substring(17, 20);
name = str.substring(12, 15).trim();
resName = str.substring(17, 20);
+ // JAL-1828 treat MSE Selenomethionine as MET (etc)
+ resName = ResidueProperties.getCanonicalAminoAcid(resName);
chain = str.substring(21, 22);
chain = str.substring(21, 22);