git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
JAL-674 patch to fix bug with showing reference annotation for legacy jalview example...
[jalview.git]
/
src
/
MCview
/
PDBChain.java
diff --git
a/src/MCview/PDBChain.java
b/src/MCview/PDBChain.java
index
8812dcc
..
49d7d4a
100755
(executable)
--- a/
src/MCview/PDBChain.java
+++ b/
src/MCview/PDBChain.java
@@
-522,6
+522,7
@@
public class PDBChain
ana.getCalcId(), ana.label);
if (transfer == null || transfer.size() == 0)
{
ana.getCalcId(), ana.label);
if (transfer == null || transfer.size() == 0)
{
+ ana = new AlignmentAnnotation(ana);
ana.liftOver(sequence, shadowMap);
ana.liftOver(dsq, sqmpping);
dsq.addAlignmentAnnotation(ana);
ana.liftOver(sequence, shadowMap);
ana.liftOver(dsq, sqmpping);
dsq.addAlignmentAnnotation(ana);
@@
-542,6
+543,7
@@
public class PDBChain
.getAlignmentAnnotations(ana.getCalcId(), ana.label);
if (transfer == null || transfer.size() == 0)
{
.getAlignmentAnnotations(ana.getCalcId(), ana.label);
if (transfer == null || transfer.size() == 0)
{
+ ana = new AlignmentAnnotation(ana);
ana.liftOver(dsq, sqmpping);
// mapping.transfer(ana);
}
ana.liftOver(dsq, sqmpping);
// mapping.transfer(ana);
}