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JAL-1644 revised Finder's implementation to use a flag to enalbe searching an alignme...
[jalview.git]
/
src
/
jalview
/
analysis
/
Finder.java
diff --git
a/src/jalview/analysis/Finder.java
b/src/jalview/analysis/Finder.java
index
b253642
..
224c60a
100644
(file)
--- a/
src/jalview/analysis/Finder.java
+++ b/
src/jalview/analysis/Finder.java
@@
-42,6
+42,8
@@
public class Finder
boolean caseSensitive = false;
boolean caseSensitive = false;
+ private boolean includeDescription = false;
+
boolean findAll = false;
com.stevesoft.pat.Regex regex = null;
boolean findAll = false;
com.stevesoft.pat.Regex regex = null;
@@
-150,7
+152,7
@@
public class Finder
}
}
}
}
- if (regex.search(seq.getDescription()))
+ if (isIncludeDescription() && regex.search(seq.getDescription()))
{
idMatch.addElement(seq);
hasResults = true;
{
idMatch.addElement(seq);
hasResults = true;
@@
-373,4
+375,14
@@
public class Finder
{
this.seqIndex = seqIndex;
}
{
this.seqIndex = seqIndex;
}
+
+ public boolean isIncludeDescription()
+ {
+ return includeDescription;
+ }
+
+ public void setIncludeDescription(boolean includeDescription)
+ {
+ this.includeDescription = includeDescription;
+ }
}
}