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Merge branch 'develop' into features/JAL-653_gffalignments
[jalview.git]
/
src
/
jalview
/
appletgui
/
AlignViewport.java
diff --git
a/src/jalview/appletgui/AlignViewport.java
b/src/jalview/appletgui/AlignViewport.java
index
ef17215
..
607dc05
100644
(file)
--- a/
src/jalview/appletgui/AlignViewport.java
+++ b/
src/jalview/appletgui/AlignViewport.java
@@
-20,6
+20,8
@@
*/
package jalview.appletgui;
*/
package jalview.appletgui;
+import java.awt.Font;
+
import jalview.analysis.NJTree;
import jalview.api.AlignViewportI;
import jalview.api.FeatureRenderer;
import jalview.analysis.NJTree;
import jalview.api.AlignViewportI;
import jalview.api.FeatureRenderer;
@@
-39,8
+41,6
@@
import jalview.structure.StructureSelectionManager;
import jalview.structure.VamsasSource;
import jalview.viewmodel.AlignmentViewport;
import jalview.structure.VamsasSource;
import jalview.viewmodel.AlignmentViewport;
-import java.awt.Font;
-
public class AlignViewport extends AlignmentViewport implements
SelectionSource, VamsasSource, CommandListener
{
public class AlignViewport extends AlignmentViewport implements
SelectionSource, VamsasSource, CommandListener
{
@@
-60,6
+60,8
@@
public class AlignViewport extends AlignmentViewport implements
private FeatureRenderer featureRenderer;
private FeatureRenderer featureRenderer;
+ private boolean includeHiddenRegion = true;
+
public void finalize()
{
applet = null;
public void finalize()
{
applet = null;
@@
-483,4
+485,14
@@
public class AlignViewport extends AlignmentViewport implements
}
}
+ public boolean isIncludeHiddenRegion()
+ {
+ return includeHiddenRegion;
+ }
+
+ public void setIncludeHiddenRegion(boolean includeHiddenRegion)
+ {
+ this.includeHiddenRegion = includeHiddenRegion;
+ }
+
}
}