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refactor to allow distinct StructureSelectionManager instances for
[jalview.git]
/
src
/
jalview
/
appletgui
/
AlignViewport.java
diff --git
a/src/jalview/appletgui/AlignViewport.java
b/src/jalview/appletgui/AlignViewport.java
old mode 100755
(executable)
new mode 100644
(file)
index
87566c6
..
264100e
--- a/
src/jalview/appletgui/AlignViewport.java
+++ b/
src/jalview/appletgui/AlignViewport.java
@@
-26,6
+26,7
@@
import jalview.bin.*;
import jalview.datamodel.*;
import jalview.schemes.*;
import jalview.structure.SelectionSource;
import jalview.datamodel.*;
import jalview.schemes.*;
import jalview.structure.SelectionSource;
+import jalview.structure.StructureSelectionManager;
import jalview.structure.VamsasSource;
public class AlignViewport implements SelectionSource, VamsasSource
import jalview.structure.VamsasSource;
public class AlignViewport implements SelectionSource, VamsasSource
@@
-144,6
+145,13
@@
public class AlignViewport implements SelectionSource, VamsasSource
String sequenceSetID;
Hashtable hiddenRepSequences;
String sequenceSetID;
Hashtable hiddenRepSequences;
+
+ public void finalize() {
+ applet=null;
+ quality=null;
+ alignment=null;
+ colSel=null;
+ }
public AlignViewport(AlignmentI al, JalviewLite applet)
{
public AlignViewport(AlignmentI al, JalviewLite applet)
{
@@
-1617,7
+1625,7
@@
public class AlignViewport implements SelectionSource, VamsasSource
public void sendSelection()
{
jalview.structure.StructureSelectionManager
public void sendSelection()
{
jalview.structure.StructureSelectionManager
- .getStructureSelectionManager().sendSelection(
+ .getStructureSelectionManager(applet).sendSelection(
new SequenceGroup(getSelectionGroup()),
new ColumnSelection(getColumnSelection()), this);
}
new SequenceGroup(getSelectionGroup()),
new ColumnSelection(getColumnSelection()), this);
}