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JAL-2438 FeatureColourFinder refactored from FeatureRenderer, fr not
[jalview.git]
/
src
/
jalview
/
appletgui
/
OverviewPanel.java
diff --git
a/src/jalview/appletgui/OverviewPanel.java
b/src/jalview/appletgui/OverviewPanel.java
index
9b2be4c
..
8427c77
100755
(executable)
--- a/
src/jalview/appletgui/OverviewPanel.java
+++ b/
src/jalview/appletgui/OverviewPanel.java
@@
-21,6
+21,7
@@
package jalview.appletgui;
import jalview.datamodel.AlignmentI;
package jalview.appletgui;
import jalview.datamodel.AlignmentI;
+import jalview.renderer.seqfeatures.FeatureColourFinder;
import java.awt.Color;
import java.awt.Dimension;
import java.awt.Color;
import java.awt.Dimension;
@@
-303,6
+304,8
@@
public class OverviewPanel extends Panel implements Runnable,
.hasHiddenColumns();
boolean hiddenRow = false;
AlignmentI alignment = av.getAlignment();
.hasHiddenColumns();
boolean hiddenRow = false;
AlignmentI alignment = av.getAlignment();
+
+ FeatureColourFinder finder = new FeatureColourFinder(fr);
for (row = 0; row <= sequencesHeight; row++)
{
if (resizeAgain)
for (row = 0; row <= sequencesHeight; row++)
{
if (resizeAgain)
@@
-353,7
+356,7
@@
public class OverviewPanel extends Panel implements Runnable,
if (av.isShowSequenceFeatures())
{
if (av.isShowSequenceFeatures())
{
- color = fr.findFeatureColour(color, seq, lastcol);
+ color = finder.findFeatureColour(color, seq, lastcol);
}
}
else
}
}
else