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JAL-3210 Barebones gradle/buildship/eclipse. See README
[jalview.git]
/
src
/
jalview
/
ext
/
ensembl
/
EnsemblProtein.java
diff --git
a/src/jalview/ext/ensembl/EnsemblProtein.java
b/src/jalview/ext/ensembl/EnsemblProtein.java
index
f586ed6
..
0280f16
100644
(file)
--- a/
src/jalview/ext/ensembl/EnsemblProtein.java
+++ b/
src/jalview/ext/ensembl/EnsemblProtein.java
@@
-23,7
+23,6
@@
package jalview.ext.ensembl;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.SequenceFeature;
import jalview.datamodel.SequenceI;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.SequenceFeature;
import jalview.datamodel.SequenceI;
-import jalview.util.Platform;
import java.util.ArrayList;
import java.util.List;
import java.util.ArrayList;
import java.util.List;
@@
-43,7
+42,8
@@
public class EnsemblProtein extends EnsemblSeqProxy
* or ENSMUSP or similar for other species
* or CCDSnnnnn.nn with at least 3 digits
*/
* or ENSMUSP or similar for other species
* or CCDSnnnnn.nn with at least 3 digits
*/
- private static Regex ACCESSION_REGEX;
+ private static final Regex ACCESSION_REGEX = new Regex(
+ "(ENS([A-Z]{3}|)P[0-9]{11}$)" + "|" + "(CCDS[0-9.]{3,}$)");
/**
* Default constructor (to use rest.ensembl.org)
/**
* Default constructor (to use rest.ensembl.org)
@@
-119,11
+119,6
@@
public class EnsemblProtein extends EnsemblSeqProxy
@Override
public Regex getAccessionValidator()
{
@Override
public Regex getAccessionValidator()
{
- if (ACCESSION_REGEX == null)
- {
- ACCESSION_REGEX = Platform.newRegex(
- "(ENS([A-Z]{3}|)P[0-9]{11}$)" + "|" + "(CCDS[0-9.]{3,}$)", null);
- }
return ACCESSION_REGEX;
}
return ACCESSION_REGEX;
}