git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
JAL-3949 Complete new abstracted logging framework in jalview.log. Updated log calls...
[jalview.git]
/
src
/
jalview
/
gui
/
PymolViewer.java
diff --git
a/src/jalview/gui/PymolViewer.java
b/src/jalview/gui/PymolViewer.java
index
d7b4236
..
efbd155
100644
(file)
--- a/
src/jalview/gui/PymolViewer.java
+++ b/
src/jalview/gui/PymolViewer.java
@@
-210,7
+210,7
@@
public class PymolViewer extends StructureViewerBase
initPymol();
} catch (Exception ex)
{
initPymol();
} catch (Exception ex)
{
- Cache.log.error("Couldn't open PyMOL viewer!", ex);
+ Cache.error("Couldn't open PyMOL viewer!", ex);
}
}
int num = -1;
}
}
int num = -1;
@@
-249,12
+249,12
@@
public class PymolViewer extends StructureViewerBase
binding.stashFoundChains(pdb, pe.getFile());
} catch (Exception ex)
{
binding.stashFoundChains(pdb, pe.getFile());
} catch (Exception ex)
{
- Cache.log.error(
+ Cache.error(
"Couldn't open " + pe.getFile() + " in Chimera viewer!",
ex);
} finally
{
"Couldn't open " + pe.getFile() + " in Chimera viewer!",
ex);
} finally
{
- // Cache.log.debug("File locations are " + files);
+ // Cache.debug("File locations are " + files);
}
}
}
}
}
}
@@
-323,7
+323,7
@@
public class PymolViewer extends StructureViewerBase
boolean opened = binding.openSession(pymolSessionFile);
if (!opened)
{
boolean opened = binding.openSession(pymolSessionFile);
if (!opened)
{
- Cache.log.error(
+ Cache.error(
"An error occurred opening PyMOL session file "
+ pymolSessionFile);
}
"An error occurred opening PyMOL session file "
+ pymolSessionFile);
}