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JAL-1760 JAL-1641 Serialisation of Hidden Seqs and Cols in JSON output. Added ability...
[jalview.git]
/
src
/
jalview
/
io
/
AppletFormatAdapter.java
diff --git
a/src/jalview/io/AppletFormatAdapter.java
b/src/jalview/io/AppletFormatAdapter.java
index
5601f27
..
e2cd43a
100755
(executable)
--- a/
src/jalview/io/AppletFormatAdapter.java
+++ b/
src/jalview/io/AppletFormatAdapter.java
@@
-20,6
+20,10
@@
*/
package jalview.io;
*/
package jalview.io;
+import java.io.File;
+import java.io.InputStream;
+import java.util.List;
+
import jalview.api.AlignViewportI;
import jalview.datamodel.Alignment;
import jalview.datamodel.AlignmentAnnotation;
import jalview.api.AlignViewportI;
import jalview.datamodel.Alignment;
import jalview.datamodel.AlignmentAnnotation;
@@
-28,10
+32,6
@@
import jalview.datamodel.AlignmentView;
import jalview.datamodel.SequenceGroup;
import jalview.util.MessageManager;
import jalview.datamodel.SequenceGroup;
import jalview.util.MessageManager;
-import java.io.File;
-import java.io.InputStream;
-import java.util.List;
-
/**
* A low level class for alignment and feature IO with alignment formatting
* methods used by both applet and application for generating flat alignment
/**
* A low level class for alignment and feature IO with alignment formatting
* methods used by both applet and application for generating flat alignment
@@
-292,6
+292,7
@@
public class AppletFormatAdapter
{
al.addGroup(sg);
}
{
al.addGroup(sg);
}
+
return al;
}
else if (format.equals(HtmlFile.FILE_DESC))
return al;
}
else if (format.equals(HtmlFile.FILE_DESC))