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JAL-3821 less ambiguous base class name for EMBL and GenBank flat file parsers
[jalview.git]
/
src
/
jalview
/
io
/
EMBLLikeFlatFile.java
diff --git
a/src/jalview/io/FlatFile.java
b/src/jalview/io/EMBLLikeFlatFile.java
similarity index 99%
rename from
src/jalview/io/FlatFile.java
rename to
src/jalview/io/EMBLLikeFlatFile.java
index
9e5c652
..
64943b2
100644
(file)
--- a/
src/jalview/io/FlatFile.java
+++ b/
src/jalview/io/EMBLLikeFlatFile.java
@@
-45,7
+45,7
@@
import jalview.util.MappingUtils;
* each line is formatted differently in GenBank and EMBL. See
* http://www.insdc.org/files/feature_table.html#7.1.
*/
* each line is formatted differently in GenBank and EMBL. See
* http://www.insdc.org/files/feature_table.html#7.1.
*/
-public abstract class FlatFile extends AlignFile
+public abstract class EMBLLikeFlatFile extends AlignFile
{
protected static final String LOCATION = "location";
{
protected static final String LOCATION = "location";
@@
-194,7
+194,7
@@
public abstract class FlatFile extends AlignFile
* @param sourceId
* @throws IOException
*/
* @param sourceId
* @throws IOException
*/
- public FlatFile(FileParse fp, String sourceId) throws IOException
+ public EMBLLikeFlatFile(FileParse fp, String sourceId) throws IOException
{
super(false, fp); // don't parse immediately
this.sourceDb = sourceId;
{
super(false, fp); // don't parse immediately
this.sourceDb = sourceId;