alignFrame = new AlignFrame(al, hiddenSeqs, colSel,
AlignFrame.DEFAULT_WIDTH, AlignFrame.DEFAULT_HEIGHT);
alignFrame.getViewport().setShowSequenceFeatures(
showSeqFeatures);
alignFrame = new AlignFrame(al, hiddenSeqs, colSel,
AlignFrame.DEFAULT_WIDTH, AlignFrame.DEFAULT_HEIGHT);
alignFrame.getViewport().setShowSequenceFeatures(
showSeqFeatures);