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JAL-629 Add --renderer arg/subval for vector output and fixed annotation renderer...
[jalview.git]
/
src
/
jalview
/
io
/
HTMLOutput.java
diff --git
a/src/jalview/io/HTMLOutput.java
b/src/jalview/io/HTMLOutput.java
index
2745420
..
ed80eb9
100644
(file)
--- a/
src/jalview/io/HTMLOutput.java
+++ b/
src/jalview/io/HTMLOutput.java
@@
-304,6
+304,11
@@
public abstract class HTMLOutput implements Runnable
public void exportHTML(String outputFile)
{
public void exportHTML(String outputFile)
{
+ exportHTML(outputFile, null);
+ }
+
+ public void exportHTML(String outputFile, String renderer)
+ {
setProgressMessage(MessageManager.formatMessage(
"status.exporting_alignment_as_x_file", getDescription()));
try
setProgressMessage(MessageManager.formatMessage(
"status.exporting_alignment_as_x_file", getDescription()));
try
@@
-332,7
+337,7
@@
public abstract class HTMLOutput implements Runnable
}
if (Jalview.isHeadlessMode())
{
}
if (Jalview.isHeadlessMode())
{
- this.run();
+ this.run(renderer);
}
else
{
}
else
{
@@
-351,4
+356,7
@@
public abstract class HTMLOutput implements Runnable
{
return description;
}
{
return description;
}
+
+ // used to pass an option such as render to run
+ public abstract void run(String string);
}
\ No newline at end of file
}
\ No newline at end of file