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JAL-3210 Improvements to eclipse detection. New src tree and SwingJS updated from...
[jalview.git]
/
src
/
jalview
/
schemes
/
AnnotationColourGradient.java
diff --git
a/src/jalview/schemes/AnnotationColourGradient.java
b/src/jalview/schemes/AnnotationColourGradient.java
index
75a07b9
..
5461ec0
100755
(executable)
--- a/
src/jalview/schemes/AnnotationColourGradient.java
+++ b/
src/jalview/schemes/AnnotationColourGradient.java
@@
-167,8
+167,8
@@
public class AnnotationColourGradient extends FollowerColourScheme
if (annotation.isRNA())
{
// reset colour palette
if (annotation.isRNA())
{
// reset colour palette
- ColourSchemeProperty.resetRnaHelicesShading();
- ColourSchemeProperty.initRnaHelicesShading(1 + (int) aamax);
+ ColourSchemes.resetRnaHelicesShading();
+ ColourSchemes.initRnaHelicesShading(1 + (int) aamax);
}
}
}
}
@@
-218,7
+218,7
@@
public class AnnotationColourGradient extends FollowerColourScheme
}
if (rna)
{
}
if (rna)
{
- ColourSchemeProperty.initRnaHelicesShading(1 + (int) aamax);
+ ColourSchemes.initRnaHelicesShading(1 + (int) aamax);
}
}
}
}
}
}
@@
-355,7
+355,7
@@
public class AnnotationColourGradient extends FollowerColourScheme
{
if (ann.isRNA())
{
{
if (ann.isRNA())
{
- result = ColourSchemeProperty.rnaHelices[(int) aj.value];
+ result = ColourSchemes.getInstance().rnaHelices[(int) aj.value];
}
else
{
}
else
{