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Merge branch 'test_paolo_JAL-1065' into Tcoffee_JAL-1065
[jalview.git]
/
src
/
jalview
/
schemes
/
ColourSchemeProperty.java
diff --git
a/src/jalview/schemes/ColourSchemeProperty.java
b/src/jalview/schemes/ColourSchemeProperty.java
index
3738f61
..
a7f2311
100755
(executable)
--- a/
src/jalview/schemes/ColourSchemeProperty.java
+++ b/
src/jalview/schemes/ColourSchemeProperty.java
@@
-383,20
+383,21
@@
public class ColourSchemeProperty
}
/**
}
/**
- * DOCUMENT ME!
+ * Construct an instance of ColourSchemeI corresponding to the given colourscheme index
*
* @param seqs
*
* @param seqs
- * DOCUMENT ME!
+ * sequences to be coloured by colourscheme
* @param width
* @param width
- * DOCUMENT ME!
+ * geometry of alignment
* @param index
* @param index
- * DOCUMENT ME!
+ * colourscheme number
*
*
- * @return DOCUMENT ME!
+ * @return null or an instance of the colourscheme configured to colour given sequence set
*/
public static ColourSchemeI getColour(java.util.Vector seqs, int width,
int index)
{
*/
public static ColourSchemeI getColour(java.util.Vector seqs, int width,
int index)
{
+ // TODO 3.0 2.8 refactor signature to take an alignmentI like container so colourschemes based on annotation can be initialised
ColourSchemeI cs = null;
switch (index)
ColourSchemeI cs = null;
switch (index)