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JAL-1645 source formatting and organise imports
[jalview.git]
/
src
/
jalview
/
util
/
Comparison.java
diff --git
a/src/jalview/util/Comparison.java
b/src/jalview/util/Comparison.java
index
835a1b4
..
95f298b
100644
(file)
--- a/
src/jalview/util/Comparison.java
+++ b/
src/jalview/util/Comparison.java
@@
-20,11
+20,11
@@
*/
package jalview.util;
*/
package jalview.util;
+import jalview.datamodel.SequenceI;
+
import java.util.ArrayList;
import java.util.List;
import java.util.ArrayList;
import java.util.List;
-import jalview.datamodel.SequenceI;
-
/**
* Assorted methods for analysing or comparing sequences.
*/
/**
* Assorted methods for analysing or comparing sequences.
*/
@@
-40,8
+40,8
@@
public class Comparison
private static final char GAP_DASH = '-';
private static final char GAP_DASH = '-';
- public static final String GapChars = new String(new char[]
- { GAP_SPACE, GAP_DOT, GAP_DASH });
+ public static final String GapChars = new String(new char[] { GAP_SPACE,
+ GAP_DOT, GAP_DASH });
/**
* DOCUMENT ME!
/**
* DOCUMENT ME!
@@
-320,11
+320,13
@@
public class Comparison
List<SequenceI> flattened = new ArrayList<SequenceI>();
for (SequenceI[] ss : seqs)
{
List<SequenceI> flattened = new ArrayList<SequenceI>();
for (SequenceI[] ss : seqs)
{
- for (SequenceI s : ss) {
- flattened.add(s);
+ for (SequenceI s : ss)
+ {
+ flattened.add(s);
}
}
}
}
- final SequenceI[] oneDArray = flattened.toArray(new SequenceI[flattened.size()]);
+ final SequenceI[] oneDArray = flattened.toArray(new SequenceI[flattened
+ .size()]);
return isNucleotide(oneDArray);
}
}
return isNucleotide(oneDArray);
}
}