git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
JAL-1942 JAL-1479 DBRefFetcher refactor
[jalview.git]
/
src
/
jalview
/
ws
/
DasSequenceFeatureFetcher.java
diff --git
a/src/jalview/ws/DasSequenceFeatureFetcher.java
b/src/jalview/ws/DasSequenceFeatureFetcher.java
index
8faba60
..
d7ba24d
100644
(file)
--- a/
src/jalview/ws/DasSequenceFeatureFetcher.java
+++ b/
src/jalview/ws/DasSequenceFeatureFetcher.java
@@
-238,6
+238,7
@@
public class DasSequenceFeatureFetcher
class FetchSeqFeatures implements Runnable
{
class FetchSeqFeatures implements Runnable
{
+ @Override
public void run()
{
startFetching();
public void run()
{
startFetching();
@@
-247,10
+248,15
@@
public class DasSequenceFeatureFetcher
class FetchDBRefs implements Runnable
{
class FetchDBRefs implements Runnable
{
+ @Override
public void run()
{
running = true;
public void run()
{
running = true;
- new DBRefFetcher(sequences, af).fetchDBRefs(true);
+ boolean isNuclueotide = af.getViewport().getAlignment()
+ .isNucleotide();
+ new jalview.ws.DBRefFetcher(sequences, af, null, af.featureSettings,
+ isNuclueotide).fetchDBRefs(true);
+
startFetching();
setGuiFetchComplete();
}
startFetching();
setGuiFetchComplete();
}