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JAL-3949 - refactor logging from jalview.bin.Cache to jalview.bin.Console
[jalview.git]
/
src
/
jalview
/
ws
/
jws1
/
Discoverer.java
diff --git
a/src/jalview/ws/jws1/Discoverer.java
b/src/jalview/ws/jws1/Discoverer.java
index
9f11064
..
4a8f512
100644
(file)
--- a/
src/jalview/ws/jws1/Discoverer.java
+++ b/
src/jalview/ws/jws1/Discoverer.java
@@
-21,6
+21,7
@@
package jalview.ws.jws1;
import jalview.bin.Cache;
package jalview.ws.jws1;
import jalview.bin.Cache;
+import jalview.bin.Console;
import jalview.gui.JvOptionPane;
import jalview.util.MessageManager;
import jalview.gui.JvOptionPane;
import jalview.util.MessageManager;
@@
-99,7
+100,7
@@
public class Discoverer implements Runnable
// timeout
} catch (Exception ex)
{
// timeout
} catch (Exception ex)
{
- Cache.error(
+ Console.error(
"Serious! Service location failed\nfor URL :" + WsURL + "\n",
ex);
"Serious! Service location failed\nfor URL :" + WsURL + "\n",
ex);
@@
-145,21
+146,21
@@
public class Discoverer implements Runnable
}
else
{
}
else
{
- Cache.info("Ignoring duplicate url in DISCOVERY_URLS list");
+ Console.info("Ignoring duplicate url in DISCOVERY_URLS list");
}
} catch (Exception ex)
{
}
} catch (Exception ex)
{
- Cache.warn("Problem whilst trying to make a URL from '"
+ Console.warn("Problem whilst trying to make a URL from '"
+ ((url != null) ? url : "<null>") + "'");
+ ((url != null) ? url : "<null>") + "'");
- Cache.warn(
+ Console.warn(
"This was probably due to a malformed comma separated list"
+ " in the DISCOVERY_URLS entry of $(HOME)/.jalview_properties)");
"This was probably due to a malformed comma separated list"
+ " in the DISCOVERY_URLS entry of $(HOME)/.jalview_properties)");
- Cache.debug("Exception was ", ex);
+ Console.debug("Exception was ", ex);
}
}
} catch (Exception ex)
{
}
}
} catch (Exception ex)
{
- Cache.warn(
+ Console.warn(
"Error parsing comma separated list of urls in DISCOVERY_URLS.",
ex);
}
"Error parsing comma separated list of urls in DISCOVERY_URLS.",
ex);
}
@@
-175,7
+176,7
@@
public class Discoverer implements Runnable
*/
static public void doDiscovery()
{
*/
static public void doDiscovery()
{
- Cache.debug("(Re)-Initialising the discovery URL list.");
+ Console.debug("(Re)-Initialising the discovery URL list.");
try
{
reallyDiscoverServices = Cache
try
{
reallyDiscoverServices = Cache
@@
-186,7
+187,7
@@
public class Discoverer implements Runnable
}
else
{
}
else
{
- Cache.debug("Setting default services");
+ Console.debug("Setting default services");
services = new Hashtable<>();
// Muscle, Clustal and JPred.
ServiceHandle[] defServices = { new ServiceHandle("MsaWS",
services = new Hashtable<>();
// Muscle, Clustal and JPred.
ServiceHandle[] defServices = { new ServiceHandle("MsaWS",
@@
-237,7
+238,7
@@
public class Discoverer implements Runnable
ServiceHandles shs = null;
try
{
ServiceHandles shs = null;
try
{
- Cache.debug("Discovering services using " + location);
+ Console.debug("Discovering services using " + location);
shs = locateWebService(location).getServices();
} catch (org.apache.axis.AxisFault f)
{
shs = locateWebService(location).getServices();
} catch (org.apache.axis.AxisFault f)
{
@@
-255,13
+256,13
@@
public class Discoverer implements Runnable
}
else
{
}
else
{
- Cache.warn("No Discovery service at " + location);
- Cache.debug("Axis Fault", f);
+ Console.warn("No Discovery service at " + location);
+ Console.debug("Axis Fault", f);
}
} catch (Exception e)
{
}
} catch (Exception e)
{
- Cache.warn("No Discovery service at " + location);
- Cache.debug("Discovery Service General Exception", e);
+ Console.warn("No Discovery service at " + location);
+ Console.debug("Discovery Service General Exception", e);
}
if ((shs != null) && shs.getServices().length > 0)
{
}
if ((shs != null) && shs.getServices().length > 0)
{
@@
-291,7
+292,7
@@
public class Discoverer implements Runnable
{
if (!cat.contains(sh[i]))
{
{
if (!cat.contains(sh[i]))
{
- Cache.debug("A " + sh[i].getAbstractName()
+ Console.debug("A " + sh[i].getAbstractName()
+ " service called " + sh[i].getName() + " exists at "
+ sh[i].getEndpointURL() + "\n");
if (!sscat.containsKey(sh[i].getAbstractName()))
+ " service called " + sh[i].getName() + " exists at "
+ sh[i].getEndpointURL() + "\n");
if (!sscat.containsKey(sh[i].getAbstractName()))
@@
-313,14
+314,14
@@
public class Discoverer implements Runnable
disc_serv = new java.net.URL(sh[i].getEndpointURL());
if (!ServiceURLList.contains(disc_serv))
{
disc_serv = new java.net.URL(sh[i].getEndpointURL());
if (!ServiceURLList.contains(disc_serv))
{
- Cache.debug(
+ Console.debug(
"Adding new discovery service at " + disc_serv);
ServiceURLList.add(disc_serv);
seenNewDiscovery = true;
}
} catch (Exception e)
{
"Adding new discovery service at " + disc_serv);
ServiceURLList.add(disc_serv);
seenNewDiscovery = true;
}
} catch (Exception e)
{
- Cache.debug("Ignoring bad discovery service URL "
+ Console.debug("Ignoring bad discovery service URL "
+ sh[i].getEndpointURL(), e);
}
}
+ sh[i].getEndpointURL(), e);
}
}
@@
-338,7
+339,7
@@
public class Discoverer implements Runnable
int s_url = 0;
if (ServiceURLList == null)
{
int s_url = 0;
if (ServiceURLList == null)
{
- Cache.debug("No service endpoints to use for service discovery.");
+ Console.debug("No service endpoints to use for service discovery.");
return;
}
while (s_url < ServiceURLList.size())
return;
}
while (s_url < ServiceURLList.size())
@@
-351,7
+352,7
@@
public class Discoverer implements Runnable
}
else
{
}
else
{
- Cache.warn("No services at "
+ Console.warn("No services at "
+ (ServiceURLList.get(s_url))
+ " - check DISCOVERY_URLS property in .jalview_properties");
}
+ (ServiceURLList.get(s_url))
+ " - check DISCOVERY_URLS property in .jalview_properties");
}