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JAL-3848 ensure annotation from a service gets a calcId so it can be updated and...
[jalview.git]
/
src
/
jalview
/
ws
/
slivkaws
/
SlivkaAnnotationServiceInstance.java
diff --git
a/src/jalview/ws/slivkaws/SlivkaAnnotationServiceInstance.java
b/src/jalview/ws/slivkaws/SlivkaAnnotationServiceInstance.java
index
3c80fbc
..
c42d42e
100644
(file)
--- a/
src/jalview/ws/slivkaws/SlivkaAnnotationServiceInstance.java
+++ b/
src/jalview/ws/slivkaws/SlivkaAnnotationServiceInstance.java
@@
-83,7
+83,7
@@
public class SlivkaAnnotationServiceInstance extends SlivkaWSInstance implements
}
Alignment aln = new Alignment(seqs.toArray(new SequenceI[0]));
if (annotFile == null
}
Alignment aln = new Alignment(seqs.toArray(new SequenceI[0]));
if (annotFile == null
- || !new AnnotationFile().readAnnotationFile(aln, annotFile.getContentUrl().toString(), DataSourceType.URL))
+ || !new AnnotationFile().readAnnotationFileWithCalcId(aln, service.getId(), annotFile.getContentUrl().toString(), DataSourceType.URL))
{
Cache.log.debug("No annotation from slivka job\n" + annotFile);
}
{
Cache.log.debug("No annotation from slivka job\n" + annotFile);
}