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JAL-3807 Fix SlivkaWSInstance not fetching alignments.
[jalview.git]
/
src
/
jalview
/
ws
/
slivkaws
/
SlivkaJPredServiceInstance.java
diff --git
a/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java
b/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java
index
a614f02
..
00843fc
100644
(file)
--- a/
src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java
+++ b/
src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java
@@
-36,7
+36,11
@@
public class SlivkaJPredServiceInstance extends SlivkaWSInstance
try {
files = client.getJobResults(jobId.getJobId());
for (RemoteFile f : files) {
try {
files = client.getJobResults(jobId.getJobId());
for (RemoteFile f : files) {
- return readAlignment(f);
+ if (f.getMimeType().equals("application/clustal")
+ || f.getMimeType().equals("application/fasta"))
+ {
+ return readAlignment(f);
+ }
}
}
catch (IOException e) {
}
}
catch (IOException e) {