+ public static class SecStructPredJob extends BaseJob
+ {
+ private final int[] delMap;
+
+ private final SequenceI refSeq;
+
+ final Map<String, SequenceInfo> seqNames;
+
+ SecStructPredJob(List<SequenceI> sequences, SequenceI refSeq,
+ int[] delMap, Map<String, SequenceInfo> seqNames)
+ {
+ super(sequences);
+ this.refSeq = refSeq;
+ this.delMap = delMap;
+ this.seqNames = seqNames;
+ }
+
+ @Override
+ public boolean isInputValid()
+ {
+ return true;
+ }
+
+ public int[] getDelMap()
+ {
+ return this.delMap;
+ }
+ }
+