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JAL-2189 format tests
[jalview.git]
/
test
/
jalview
/
ext
/
jmol
/
JmolVsJalviewPDBParserEndToEndTest.java
diff --git
a/test/jalview/ext/jmol/JmolVsJalviewPDBParserEndToEndTest.java
b/test/jalview/ext/jmol/JmolVsJalviewPDBParserEndToEndTest.java
index
c984b3a
..
b6aa375
100644
(file)
--- a/
test/jalview/ext/jmol/JmolVsJalviewPDBParserEndToEndTest.java
+++ b/
test/jalview/ext/jmol/JmolVsJalviewPDBParserEndToEndTest.java
@@
-65,15
+65,15
@@
public class JmolVsJalviewPDBParserEndToEndTest
{
try
{
{
try
{
- String testSeq = mcseqs.remove(0).getSequenceAsString();
+ String testSeq = mcseqs.remove(0).getSequenceAsString();
if (!sq.getSequenceAsString().equals(testSeq))
if (!sq.getSequenceAsString().equals(testSeq))
- {
- ++totalFail;
+ {
+ ++totalFail;
System.err.println("Test Failed for " + pdbStr + ". Diff:");
System.err.println("Test Failed for " + pdbStr + ". Diff:");
- System.err.println(sq.getSequenceAsString());
- System.err.println(testSeq);
- failedFiles.add(pdbStr);
- }
+ System.err.println(sq.getSequenceAsString());
+ System.err.println(testSeq);
+ failedFiles.add(pdbStr);
+ }
++totalSeqScanned;
} catch (Exception e)
{
++totalSeqScanned;
} catch (Exception e)
{