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JAL-3692 parse multiline CDS location correctly
[jalview.git]
/
test
/
jalview
/
io
/
EmblFlatFileTest.java
diff --git
a/test/jalview/io/EmblFlatFileTest.java
b/test/jalview/io/EmblFlatFileTest.java
index
2898a06
..
5d8ef21
100644
(file)
--- a/
test/jalview/io/EmblFlatFileTest.java
+++ b/
test/jalview/io/EmblFlatFileTest.java
@@
-3,9
+3,9
@@
package jalview.io;
import static org.testng.Assert.assertEquals;
import static org.testng.Assert.assertTrue;
import static org.testng.AssertJUnit.assertNotNull;
import static org.testng.Assert.assertEquals;
import static org.testng.Assert.assertTrue;
import static org.testng.AssertJUnit.assertNotNull;
+import static org.testng.AssertJUnit.assertNull;
import static org.testng.AssertJUnit.assertSame;
import static org.testng.AssertJUnit.fail;
import static org.testng.AssertJUnit.assertSame;
import static org.testng.AssertJUnit.fail;
-import static org.testng.AssertJUnit.assertNull;
import java.io.File;
import java.io.IOException;
import java.io.File;
import java.io.IOException;
@@
-14,8
+14,10
@@
import java.util.Arrays;
import java.util.List;
import java.util.Set;
import java.util.List;
import java.util.Set;
+import org.testng.annotations.BeforeClass;
import org.testng.annotations.Test;
import org.testng.annotations.Test;
+import jalview.bin.Cache;
import jalview.datamodel.DBRefEntry;
import jalview.datamodel.Mapping;
import jalview.datamodel.SequenceFeature;
import jalview.datamodel.DBRefEntry;
import jalview.datamodel.Mapping;
import jalview.datamodel.SequenceFeature;
@@
-25,6
+27,12
@@
import jalview.util.MapList;
public class EmblFlatFileTest
{
public class EmblFlatFileTest
{
+ @BeforeClass(alwaysRun = true)
+ public void setUp()
+ {
+ Cache.initLogger();
+ }
+
/**
* A fairly tough test, using J03321 (circular DNA), which has 8 CDS features,
* one of them reverse strand
/**
* A fairly tough test, using J03321 (circular DNA), which has 8 CDS features,
* one of them reverse strand