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JAL-3855 auto select clusters and fix up colouring/propagation on calculation & tree...
[jalview.git]
/
test
/
jalview
/
project
/
Jalview2xmlTests.java
diff --git
a/test/jalview/project/Jalview2xmlTests.java
b/test/jalview/project/Jalview2xmlTests.java
index
6518693
..
c9532cc
100644
(file)
--- a/
test/jalview/project/Jalview2xmlTests.java
+++ b/
test/jalview/project/Jalview2xmlTests.java
@@
-1574,7
+1574,7
@@
public class Jalview2xmlTests extends Jalview2xmlBase
sq.getLength(), sq.getLength());
assertEquals(vals[3][4], paevals[3][4]);
assertEquals(vals[4][3], paevals[4][3]);
sq.getLength(), sq.getLength());
assertEquals(vals[3][4], paevals[3][4]);
assertEquals(vals[4][3], paevals[4][3]);
- dummyMat.setGroupSet(GroupSet.makeGroups(dummyMat, 0.5f, false));
+ dummyMat.setGroupSet(GroupSet.makeGroups(dummyMat, false,0.5f, false));
Assert.assertNotSame(dummyMat.getNewick(), "");
AlignmentAnnotation paeCm = sq.addContactList(dummyMat);
al.addAnnotation(paeCm);
Assert.assertNotSame(dummyMat.getNewick(), "");
AlignmentAnnotation paeCm = sq.addContactList(dummyMat);
al.addAnnotation(paeCm);