created features report

[proteocache.git] / datadb / compbio / cassandra / ProteinBean.java

diff --git a/datadb/compbio/cassandra/ProteinBean.java b/datadb/compbio/cassandra/ProteinBean.java
index 80f111b..d5e700b 100644 (file)
--- a/datadb/compbio/cassandra/ProteinBean.java
+++ b/datadb/compbio/cassandra/ProteinBean.java
@@ -7,6 +7,7 @@ import java.util.Map;
 
 public class ProteinBean implements PredictionIndex{
        private String sequence;
+       private String jnetpred;
        private List<String> jobid;
        private LinkedHashMap<String,String> predictions;
        private List<String> subProt;           // protein sequence divided by several parts for highlighting the particular part
@@ -19,6 +20,10 @@ public class ProteinBean implements PredictionIndex{
                setPredictions(pred);
        }
        
+       public void setSequence (String seq) {
+               this.sequence = seq;
+       }
+       
        public void setPredictions(Map<String,String> pred) {
                if (predictions == null)
                        predictions = new LinkedHashMap<String,String>();       
@@ -32,6 +37,17 @@ public class ProteinBean implements PredictionIndex{
                return sequence;
        }
        
+       public String getJnetpred () {
+               return jnetpred;
+       }
+       
+       public void setJnetpred (Map<String,String> pred) {
+               if (pred != null) {
+                       if (pred.containsKey("jnetpred")) 
+                               jnetpred = pred.get("jnetpred");
+               }
+       }
+       
        public List<String> getJobid () {
                return jobid;
        }