## public interface JalviewJSApi
-# full list of available methods:
+# full list of available methods (from JalviewLiteJsApi):
public boolean addPdbFile(AlignFrame alFrame, String sequenceId, String pdbEntryString, String pdbFile);
- public String arrayToSeparatorList(String[] array);
public String getAlignment(String format);
public String getAlignment(String format, String suffix);
public String getAlignmentFrom(AlignFrame alf, String format);
public void select(String sequenceIds, String columns, String sep);
public void selectIn(AlignFrame alf, String sequenceIds, String columns);
public void selectIn(AlignFrame alf, String sequenceIds, String columns, String sep);
- public String[] separatorListToArray(String list);
public void setFeatureGroupState(String groups, boolean state);
public void setFeatureGroupState(String[] groups, boolean state);
public void setFeatureGroupStateOn(AlignFrame alf, String groups, boolean state);
public void showOverview();
public void updateForAnnotations();
+# addition available methods (from JalviewLite):
+
+ public static String getBuildDate()
+ public static String getInstallation()
+ public static String getVersion()
+
+
+
# proposed alias list:
- remove overloaded methods
# unknown methods/shouldn't be in interface?
- public String arrayToSeparatorList(String[] array);
public Object getFrameForSource(VamsasSource source);
- public String getSeparator();
- public String[] separatorListToArray(String list);
public void setSeparator(String separator);
\ No newline at end of file