JAL-1819 Test cases for Identify file

[jalview.git] / examples / test.aln

diff --git a/examples/test.aln b/examples/test.aln
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+CLUSTAL
+
+FER_CAPAA/1-97     -----------------------------------------------------------A
+FER_CAPAN/1-144    MA------SVSATMISTSFMPRKPAVTSL-KPIPNVGE--ALFGLKS-A--NGGKVTCMA
+FER1_SOLLC/1-144   MA------SISGTMISTSFLPRKPAVTSL-KAISNVGE--ALFGLKS-G--RNGRITCMA
+Q93XJ9_SOLTU/1-144 MA------SISGTMISTSFLPRKPVVTSL-KAISNVGE--ALFGLKS-G--RNGRITCMA
+FER1_PEA/1-149     MATT---PALYGTAVSTSFLRTQPMPMSV-TTTKAFSN--GFLGLKT-SLKRGDLAVAMA
+Q7XA98_TRIPR/1-152 MATT---PALYGTAVSTSFMRRQPVPMSV-ATTTTTKAFPSGFGLKSVSTKRGDLAVAMA
+FER1_MESCR/1-148   MAAT--TAALSGATMSTAFAPK--TPPMTAALPTNVGR--ALFGLKS-SASR-GRVTAMA
+FER1_SPIOL/1-147   MAAT--TTTMMG--MATTFVPKPQAPPMMAALPSNTGR--SLFGLKT-GSR--GGRMTMA
+FER3_RAPSA/1-96    -----------------------------------------------------------A
+FER1_ARATH/1-148   MAST----ALSSAIVGTSFIRRSPAPISLRSLPSANTQ--SLFGLKS-GTARGGRVTAMA
+FER_BRANA/1-96     -----------------------------------------------------------A
+FER2_ARATH/1-148   MAST----ALSSAIVSTSFLRRQQTPISLRSLPFANTQ--SLFGLKS-STARGGRVTAMA
+Q93Z60_ARATH/1-118 MAST----ALSSAIVSTSFLRRQQTPISLRSLPFANTQ--SLFGLKS-STARGGRVTAMA
+FER1_MAIZE/1-150   MATVLGSPRAPAFFFSSSSLRAAPAPTAV--ALPAAKV--GIMGRSA-SSRR--RLRAQA
+O80429_MAIZE/1-140 MAAT---------ALSMSILR---APPPCFSSPLRLRV--AVAKPLA-APMRRQLLRAQA
+1A70|/1-97         -----------------------------------------------------------A
+
+FER_CAPAA/1-97     SYKVKLITPDGPIEFDCPDDVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDG
+FER_CAPAN/1-144    SYKVKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDG
+FER1_SOLLC/1-144   SYKVKLITPEGPIEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDG
+Q93XJ9_SOLTU/1-144 SYKVKLITPDGPIEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDG
+FER1_PEA/1-149     SYKVKLVTPDGTQEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDG
+Q7XA98_TRIPR/1-152 TYKVKLITPEGPQEFDCPDDVYILDHAEEVGIELPYSCRAGSCSSCAGKVVNGNVNQEDG
+FER1_MESCR/1-148   AYKVTLVTPEGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDG
+FER1_SPIOL/1-147   AYKVTLVTPTGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQ
+FER3_RAPSA/1-96    TYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQ
+FER1_ARATH/1-148   TYKVKFITPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQ
+FER_BRANA/1-96     TYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDE
+FER2_ARATH/1-148   TYKVKFITPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQ
+Q93Z60_ARATH/1-118 TYKVKFITPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQ
+FER1_MAIZE/1-150   TYNVKLITPEGEVELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQ
+O80429_MAIZE/1-140 TYNVKLITPEGEVELQVPDDVYILDFAEEEGIDLPFSCRAGSCSSCAGKVVSGSVDQSDQ
+1A70|/1-97         AYKVTLVTPTGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQ
+
+FER_CAPAA/1-97     NFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAELVG-
+FER_CAPAN/1-144    NFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAELVG-
+FER1_SOLLC/1-144   NFLDEDQEAAGFVLTCVAYPKGDVTIETHKEEELTA-
+Q93XJ9_SOLTU/1-144 KFLDDDQEAAGFVLTCVAYPKCDVTIETHKEEELTA-
+FER1_PEA/1-149     SFLDDEQIEAGFVLTCVAYPTSDVVIETHKEEDLTA-
+Q7XA98_TRIPR/1-152 SFLDDEQIEGGWVLTCVAFPTSDVTIETHKEEELTA-
+FER1_MESCR/1-148   SFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEELTA-
+FER1_SPIOL/1-147   SFLDDDQIDEGWVLTCAAYPVSDVTIETHKEEELTA-
+FER3_RAPSA/1-96    SFLDDDQIAEGFVLTCAAYPTSDVTIETHREEDMV--
+FER1_ARATH/1-148   SFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV--
+FER_BRANA/1-96     SFLDDDQIAEGFVLTCAAYPTSDVTIETHKEEELV--
+FER2_ARATH/1-148   SFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAIM--
+Q93Z60_ARATH/1-118 SFLDD--------------------------------
+FER1_MAIZE/1-150   SYLDDGQIADGWVLTCHAYPTSDVVIETHKEEELTGA
+O80429_MAIZE/1-140 SFLNDNQVADGWVLTCAAYPTSDVVIETHKEDDLL--
+1A70|/1-97         SFLDDDQIDEGWVLTCAAYPVSDVTIETHKKEELTA
+