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JAL-2375 JAL-2376 First commit of implementation for Phyre2 result browsing, template...
[jalview.git] / examples / testdata / phyre2results / 56da5616b4559c93 / metapoing.stdout
diff --git a/examples/testdata/phyre2results/56da5616b4559c93/metapoing.stdout b/examples/testdata/phyre2results/56da5616b4559c93/metapoing.stdout
new file mode 100644 (file)
index 0000000..a56c0f3
--- /dev/null
+++ b/examples/testdata/phyre2results/56da5616b4559c93/metapoing.stdout
@@ -0,0 +1,76 @@
+/bmm/www/servers/phyre2/bin/poing
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c4n58A_.1.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1a70a_.2.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1offa_.3.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1frra_.4.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1pfda_.5.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1frda_.6.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1fxia_.7.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1gaqb_.8.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1iuea_.9.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1awda_.10.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1wria_.11.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1czpa_.12.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d2cjoa_.13.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d4fxca_.14.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c4itkA_.15.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c1krhA_.16.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1krha3.17.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1jq4a_.18.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c4wqmA_.19.pdb
+file: /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c2piaA_.20.pdb
+MASVSATMISTSFMPRKPAVTSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGW
+CHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHCCE
+++++++++--++++++++++++++++++++++--------------+++++++++++++--++++++++++++++++++++++++++++++++++++++++++++++--+++++++++++  HHscore 0.999, sequence id 22%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c2piaA_.20.pdb
+
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 50%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1frda_.6.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 70%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1pfda_.5.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 24%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1krha3.17.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 1.000, sequence id 71%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1a70a_.2.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 71%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1gaqb_.8.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 25%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c1krhA_.16.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 64%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1czpa_.12.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 48%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1iuea_.9.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 62%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1fxia_.7.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 64%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d4fxca_.14.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 1.000, sequence id 73%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1offa_.3.pdb
+-----------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 63%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d2cjoa_.13.pdb
+------------------------------------------------++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 62%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1frra_.4.pdb
+-------------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 57%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c4itkA_.15.pdb
+-------------------------------------------------+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 68%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1awda_.10.pdb
+------------------------------------------------+++++++++++++++++++++++++++++++-++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 59%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1wria_.11.pdb
+-----------------------------------------------++++++++++++--++++++++++++++++++++++++++++++++++++++++++++++++++++++-++++  HHscore 1.000, sequence id 54%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c4n58A_.1.pdb
+------------------------------------------------++++++--++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 28%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c4wqmA_.19.pdb
+----------------------------------------------++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++  HHscore 0.999, sequence id 29%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1jq4a_.18.pdb
+
+VLTCVAYPQSDVTIETHKEAELVG
+EEEEEEEEECCEEEEECCHHHHCC
+++++++++++++++++--------  HHscore 0.999, sequence id 22%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c2piaA_.20.pdb
+
++++++++++++++++++++++++-  HHscore 0.999, sequence id 50%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1frda_.6.pdb
++++++++++++++++++++++++-  HHscore 0.999, sequence id 70%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1pfda_.5.pdb
++++++++++++++++++++++++-  HHscore 0.999, sequence id 24%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1krha3.17.pdb
+++++++++++++++++++++++++  HHscore 1.000, sequence id 71%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1a70a_.2.pdb
+++++++++++++++++++++++++  HHscore 0.999, sequence id 71%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1gaqb_.8.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 25%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c1krhA_.16.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 64%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1czpa_.12.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 48%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1iuea_.9.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 62%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1fxia_.7.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 64%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d4fxca_.14.pdb
+++++++++++++++++++++++--  HHscore 1.000, sequence id 73%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1offa_.3.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 63%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d2cjoa_.13.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 62%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1frra_.4.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 57%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c4itkA_.15.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 68%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1awda_.10.pdb
+++++++++++++++++++++++--  HHscore 0.999, sequence id 59%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1wria_.11.pdb
++++++++++++++++++++++++-  HHscore 1.000, sequence id 54%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c4n58A_.1.pdb
+++++++++++++++++++++++++  HHscore 0.999, sequence id 28%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/c4wqmA_.19.pdb
+++++++++++++++++++------  HHscore 0.999, sequence id 29%  /bmm/www/servers/phyre2/public_html/phyre2_output/56da5616b4559c93/d1jq4a_.18.pdb
+
+88% of protein confidently modelled...
+More than 50% of protein confidently modelled - using mergeProteins.py
+Protein length: 144  of which strand: 36
+Estimated time per simulation: 12 minutes
+Number of repetitions of folding: 11
+Estimated total CPU time: 2 hours
+Estimated wallclock time on 100 processors: 0 hours