deleted jbake example directory and the old biojs template directory
[jalview.git] / examples-jbake / templates / header.ftl
diff --git a/examples-jbake/templates/header.ftl b/examples-jbake/templates/header.ftl
deleted file mode 100644 (file)
index a32ffc9..0000000
+++ /dev/null
@@ -1,147 +0,0 @@
-<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
-<!--
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
- * 
- * This file is part of Jalview.
- * 
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- *  
- * Jalview is distributed in the hope that it will be useful, but 
- * WITHOUT ANY WARRANTY; without even the implied warranty 
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
- * PURPOSE.  See the GNU General Public License for more details.
- * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
- * The Jalview Authors are detailed in the 'AUTHORS' file.
--->
-<head>
-  <TITLE>${content.title}</TITLE>
-  <meta http-equiv="Content-Type" content="text/html; charset=UTF-8" /> 
-
-  <link href="css/reset.css" rel="stylesheet" type="text/css" />
-  <link href="css/style.css" rel="stylesheet" type="text/css" />
-  
-  <!--[if IE 6]>
-      <link rel="stylesheet" type="text/css" href="css/ie6.css" />
-      <![endif]-->
-
-  <!--[if IE 7]>
-      <link rel="stylesheet" type="text/css" href="css/ie7.css" />
-      <![endif]-->
-
-  <!-- dd menu -->
-  <script type="text/javascript">
-    <!--
-       var timeout         = 500;
-       var closetimer  = 0;
-       var ddmenuitem      = 0;
-
-       // open hidden layer
-       function mopen(id)
-       { 
-       // cancel close timer
-       mcancelclosetime();
-
-       // close old layer
-       if(ddmenuitem) ddmenuitem.style.visibility = 'hidden';
-
-       // get new layer and show it
-       ddmenuitem = document.getElementById(id);
-       ddmenuitem.style.visibility = 'visible';
-
-       }
-       // close showed layer
-       function mclose()
-       {
-       if(ddmenuitem) ddmenuitem.style.visibility = 'hidden';
-       }
-
-       // go close timer
-       function mclosetime()
-       {
-       closetimer = window.setTimeout(mclose, timeout);
-       }
-
-       // cancel close timer
-       function mcancelclosetime()
-       {
-       if(closetimer)
-       {
-       window.clearTimeout(closetimer);
-       closetimer = null;
-       }
-       }
-
-       // close layer when click-out
-       document.onclick = mclose; 
-       // -->
-  </script>
-  <script>
-    <!--//--><![CDATA[//><!--
-var _gaq = _gaq || [];_gaq.push(["_setAccount", "UA-9060947-1"]);_gaq.push(["_trackPageview"]);(function() {var ga = document.createElement("script");ga.type = "text/javascript";ga.async = true;ga.src = ("https:" == document.location.protocol ? "https://ssl" : "http://www") + ".google-analytics.com/ga.js";var s = document.getElementsByTagName("script")[0];s.parentNode.insertBefore(ga, s);})();
-//--><!]]>
-  </script>
-<#if (content.hclass?exists) > 
-  <#include content.hclass />
-</#if>
-
-</head>
-
-
-<body>
-
-
-  <div id="header">
-    <div id="logo"><a href="http://www.jalview.org" title="Home"></a></div>
-    <ul id="buttons">
-      <li id="applet"><a href="applets.html" title="applet"></a></li>
-      <li id="desktop"><a href="../webstart/jalview.jnlp" title="desktop"></a></li>
-    </ul>
-  </div>
-
-  
-  <div id ="nav">
-    <div id="navInner">
-
-      <ul id="sddm">
-       <li><a href="http://www.jalview.org">Home</a></li>
-       <li><a href="http://www.jalview.org/about" onmouseover="mopen('m1')" onmouseout="mclosetime()">About</a>
-         <div id="m1" onmouseover="mcancelclosetime()" onmouseout="mclosetime()">
-           <a href="http://www.jalview.org/about/documentation">Documentation</a>
-           <a href="http://www.jalview.org/about/citation">Publications</a>
-           <a href="http://www.jalview.org/about/credits">Credits</a>
-         </div>
-       </li>
-       <li><a href="http://www.jalview.org/faq">FAQ</a></li>
-       <li><a href="http://www.jalview.org/community" onmouseover="mopen('m3')" onmouseout="mclosetime()" class="community">Community</a>
-         <div id="m3" onmouseover="mcancelclosetime()" onmouseout="mclosetime()">
-           <a href="http://www.jalview.org/mailman/listinfo/jalview-announce">News Mailing List</a>
-           <a href="http://www.jalview.org/mailman/listinfo/jalview-discuss">Discussion Mailing List</a>
-           <a href="http://www.jalview.org/community/links">Links</a>
-           <a href="http://www.jalview.org/community/community-news">Community News</a>
-         </div>
-       </li>
-       <li><a href="http://www.jalview.org/development" onmouseover="mopen('m4')" onmouseout="mclosetime()" class="development">Development</a>
-         <div id="m4" onmouseover="mcancelclosetime()" onmouseout="mclosetime()">
-           <a href="http://www.jalview.org/development/release-history">Release History</a>
-           <a href="http://issues.jalview.org">Jalview Bug Tracker</a>
-           <a href="http://source.jalview.org/gitweb/">Jalview Git Web</a>
-           <a href="http://www.jalview.org/development/development-news">Development News</a>
-         </div>
-       </li>
-       <li><a href="http://www.jalview.org/training" onmouseover="mopen('m5')" onmouseout="mclosetime()" class="training">Training</a>
-         <div id="m5" onmouseover="mcancelclosetime()" onmouseout="mclosetime()">
-           <a href="http://www.jalview.org/training/training-courses">Training Courses</a>
-           <a href="http://www.jalview.org/training/training-news">Training News</a>
-         </div>
-       </li>
-       <li><a href="http://www.jalview.org/download" class="download-right">Download</a></li>
-      </ul>
-      <div style="clear:both"></div>
-    </div>
-
-  </div>
-<div id="pageWrap">