JAL-957 first attempt to build examples with jbake

[jalview.git] / examples-jbake / templates / jvl_embedded.ftl

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+
+<h1>Embedded viewing of Alignments</h1>
+<p>The alignment below was generated from the following files:
+  <ul>
+    <li><a href="plantfdx.fa">plantfdx.fa</a> - Alignment file in
+      FASTA format</li>
+    <li><a href="plantfdx.features">plantfdx.features</a> - Jalview
+      Format Sequence Features file</li>
+    <li><a href="plantfdx.annotations">plantfdx.annotations</a> -
+      Jalview Alignment Annotations File</li>
+  </ul>
+  <@jvlitebutton appjar="${content.jvl}" width=756 height=560 
+                params={
+                "file":"plantfdx.fa",
+                "annotations":"plantfdx.annotations",
+                "features":"plantfdx.features",
+                "embedded":"true",
+                "userDefinedColour":"C=yellow; R,K,H=FF5555; D,E=5555FF",
+                "showFullId":"false"}></@jvlitebutton>
+  </p>