--- /dev/null
+<h2>Embedded viewing of Alignments</h2>
+<p>The alignment below was generated from the following files:
+ <ul>
+ <li><a href="plantfdx.fa">plantfdx.fa</a> - Alignment file in
+ FASTA format</li>
+ <li><a href="plantfdx.features">plantfdx.features</a> - Jalview
+ Format Sequence Features file</li>
+ <li><a href="plantfdx.annotations">plantfdx.annotations</a> -
+ Jalview Alignment Annotations File</li>
+ </ul>
+ <@jvlitebutton appjar="${content.jvl}" width=756 height=560
+ params={
+ "file":"plantfdx.fa",
+ "annotations":"plantfdx.annotations",
+ "features":"plantfdx.features",
+ "embedded":"true",
+ "userDefinedColour":"C=yellow; R,K,H=FF5555; D,E=5555FF",
+ "showFullId":"false"} />
+</p>