+++ /dev/null
-<h2><a href="jalviewLiteJs.html">JalviewLite API</a> Demo</h2>
-<p>Using the Javascript API to fill out forms using data from JalviewLite
-<br/>Click the Javascript buttons below to interact with the Applet
-instance on the page.</p>
-View the source in your browser to see how it has been done. <br/>
-<a name="api">View the full <a href="jalviewLiteJs.html">JalviewLite API documentation</a>.</a>
-<applet code="jalview.bin.JalviewLite" width="0" height="0"
- archive="${content.jvl},${content.jmol}" name="Jalview">
- <#if content.permissions?exists><param name="permissions" value="${content.permissions}"/></#if>
- <param name="file" value="plantfdx.fa"/>
- <param name="features" value="plantfdx.features"/>
- <param name="wrap" value="true"/>
- <param name="showAnnotation" value="false"/>
- <param name="windowHeight" value="500"/>
- <param name="windowWidth" value="650"/>
- <param name="showFullId" value="false"/>
- <param name="linkLabel_1" value="Uniprot"/>
- <param name="linkUrl_1"
- value="http://www.uniprot.org/uniprot/$SEQUENCE_ID$"/>
- <param name="linkLabel_2" value="Expasy">
- <param name="linkUrl_2"
- value="http://us.expasy.org/cgi-bin/niceprot.pl?$SEQUENCE_ID$"/>
- <param name="hidefeaturegroups" value="uniprot" />
- <param name="showbutton" value="false" />
-</applet>
-<form name="exampleForm"><br/>
- <br/>
- <center><strong>Using the Jalview Applet for Input
- to an HTML Form</strong></center>
- <div align="center"><input type="button"
- onClick="document.forms.exampleForm.exampleTextarea.value=document.applets.Jalview.getAlignment('fasta', 'false')"
- value="Fill Form from Jalview" /> <br/>
- <br/>
- <textarea name="exampleTextarea" cols="55" rows="9"></textarea></div>
-</form>
-<center><strong>Make a new View and Get and Set
- Group Display List</strong></center>
-<form name="groupForm">
- <div align="center"><input type="button"
- onClick="document.forms.groupForm.groups.value=document.applets.Jalview.getFeatureGroups()"
- value="Get groups" /> <input type="button"
- onClick="document.applets.Jalview.newView()" value="new View" /> <br/>
- <textarea name="groups" cols="55" rows="9"></textarea> <br/>
- <input type="button"
- onClick="document.applets.Jalview.setFeatureGroupState(document.forms.groupForm.groups.value, true)"
- value="Display groups" /> <input type="button"
- onClick="document.applets.Jalview.setFeatureGroupState(document.forms.groupForm.groups.value, false)"
- value="Hide groups" /></div>
-</form>
-</div>