JAL-629 Updated help docs and fixed structure image subvalues
[jalview.git] / help / help / helpTOC.xml
index f6bb7c7..d7ff3d4 100755 (executable)
                        <tocitem text="Groovy Features Counter example" target="groovy.featurescounter"/>
                </tocitem>
                <tocitem text="Command Line" target="commandline" expand="false">
-                       <tocitem text="Command Line: summary" target="clarguments" />
-                       <tocitem text="Command Line: introduction" target="clarguments-intro" />
+                       <tocitem text="Command Line: introduction and reference" target="clarguments" />
                        <tocitem text="Command Line: basic usage" target="clarguments-basic" />
                        <tocitem text="Command Line: advanced usage" target="clarguments-advanced" />
                        <tocitem text="Command Line: argument files" target="clarguments-argfiles" />
+                       <tocitem text="Command Line: reference" target="clarguments-reference" />
                        <tocitem text="Command Line: old command line arguments" target="clarguments-old" />
                </tocitem>
                <tocitem text="Memory Settings" target="memory" expand="false"/>