<tr>
<td width="60" align="center" nowrap><strong><a
id="Jalview.2.11.2">2.11.2</a><a id="Jalview.2.11.2.0">.0</a><br />
- <em>29/09/2021</em></strong></td>
+ <em>24/02/2022</em></strong></td>
<td align="left" valign="top">
- <ul>
- <li><!-- --></li>
- </ul>
- <em>Development</em>
+ <ul>
+ <li>
+ <!-- JAL- -->
+ </li>
+ <li>
+ <!-- JAL-3863 -->Support for Canonical Uniprot IDs
+ </li>
+ </ul> <em>JalviewJS</em>
+ <ul><li><!-- 3624 -->PDB structures mapped to Uniprot Sequences with SIFTS</li>
+ <li></li>
+ </ul> <em>Development</em>
<ul>
<li>Updated building instructions</li>
- </ul></td>
+ <li>First integrated JalviewJS and Jalview release</li>
+ </ul>
+
+ </td>
<td>
<ul>
<li>
- <!-- JAL-3840 -->Occupancy calculation is incorrect for
- alignment columns with over -1+2^32 gaps (breaking filtering
- and display)
+ <!-- JAL-3700,JAL-3751,JAL-3763, JAL-3725 -->Selections not propagated between Linked CDS - Protein alignments and their trees (known defect from 2.11.1.3)
</li>
<li>
- <!-- JAL-3833 -->Caps on Hi-DPI scaling to prevent crazy
- scale factors being set with buggy window-managers (linux
- only)
+ <!-- JAL-3761 -->Not all codon positions highlighted for
+ overlapping exon splice sites (e.g due to RNA slippage)
</li>
<li>
- <!-- JAL-3915 -->Removed RNAview checkbox and logic from Structure Preferences
+ <!-- JAL-3915 -->Removed RNAview checkbox and logic from
+ Structure Preferences
</li>
+ <li><!-- JAL-3583 -->Tooltip behaviour improved (slightly)</li>
+ <li><!-- JAL-3162 -->Can edit a feature so that start > end</li>
+ <li><!-- JAL-2848 -->Cancel from Amend Features doesn't reset a modified graduated colour</li>
</ul> <em>Development</em>
<ul>
- <li>Fixed non-fatal gradle errors during build</li>
+ <li>Gradle<ul><li>Fixed non-fatal gradle errors during build</li>
+ <li><!-- JAL-3745 -->Updated build.gradle for use with Gradle v.6.6+</li></ul></li>
+
</ul>
</td>
</tr>
- <tr>
+ <tr>
+ <td width="60" align="center" nowrap><strong><a
+ id="Jalview.2.11.1">2.11.1</a><a id="Jalview.2.11.1.7">.7</a><br />
+ <em>18/01/2022</em></strong></td>
+ <td></td>
+ <td align="left" valign="top">
+ <ul>
+ <li>
+ <!-- JAL-3703, JAL-3935 -->Files open in Jalview cannot be
+ updated by Jalview or other applications (Windows, other non
+ Unix/BSD OSs)
+ </li>
+ </ul> <em>Security</em>
+ <ul>
+ <li>
+ <!-- JAL-3937 -->Enable AIA download of HTTPS intermediate
+ certificates.
+ </li>
+ </ul>
+ </tr>
+ <tr>
<td width="60" align="center" nowrap><strong><a
id="Jalview.2.11.1">2.11.1</a><a id="Jalview.2.11.1.6">.6</a><br />
<em>6/01/2022</em></strong></td>