added command line help documentation and preferences help to

[jalview.git] / help / help.jhm

diff --git a/help/help.jhm b/help/help.jhm
index 1ff788f..056a813 100755 (executable)
--- a/help/help.jhm
+++ b/help/help.jhm
@@ -23,6 +23,8 @@
    <mapID target="seqfeatures.settings" url="html/features/featuresettings.html"/>
    <mapID target="viewingpdbs" url="html/features/viewingpdbs.html"/>
    <mapID target="preferences" url="html/features/preferences.html"/>     
+   <mapID target="commandline" url="html/features/commandline.html"/>
+   <mapID target="clarguments" url="html/features/clarguments.html"/>
    <mapID target="io" url="html/io/index.html"/>
    <mapID target="io.modellerpir" url="html/io/modellerpir.html"/>
    <mapID target="export" url="html/io/export.html"/>